Canonical Allele Identifier: CA913310492

Gene: PTPN22 AP4B1-AS1

Linked Data

• dbSNP Id: rs1558027609
• gnomAD v2: 1-114377410-T-A
• gnomAD v3: 1-113834788-T-A
• gnomAD v4: 1-113834788-T-A

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.113834788T>A , CM000663.2:g.113834788T>A	GRCh38
NC_000001.10:g.114377410T>A , CM000663.1:g.114377410T>A	GRCh37
NC_000001.9:g.114178933T>A	NCBI36
NG_011432.1:g.41966A>T

Transcript Alleles

HGVS	Amino-acid change
ENST00000359785.10:c.1894+122A>T (PTPN22) MANE Select	ENSP00000352833.5:n.1894+122A>T
ENST00000359785.9:c.1894+122A>T (PTPN22)	ENSP00000352833.5:n.1894+122A>T
ENST00000420377.6:c.1894+122A>T (PTPN22)	ENSP00000388229.2:n.1894+122A>T
ENST00000460620.5:c.469-15134A>T (PTPN22)	ENSP00000433141.1:n.469-15134A>T
ENST00000484147.5:n.1935+122A>T (PTPN22)
ENST00000525799.1:c.1513+122A>T (PTPN22)	ENSP00000432674.1:n.1513+122A>T
ENST00000528414.5:c.1729+122A>T (PTPN22)	ENSP00000435176.1:n.1729+122A>T
ENST00000532224.5:c.*1172+122A>T (PTPN22)	ENSP00000431249.1:n.*1172+122A>T
ENST00000538253.5:c.1822+122A>T (PTPN22)	ENSP00000439372.2:n.1822+122A>T
NM_001193431.1:c.1894+122A>T (PTPN22)	NP_001180360.1:n.1894+122A>T
NM_001193431.2:c.1894+122A>T (PTPN22)	NP_001180360.1:n.1894+122A>T
NM_001308297.1:c.1822+122A>T (PTPN22)	NP_001295226.1:n.1822+122A>T
NM_012411.4:c.1729+122A>T (PTPN22)	NP_036543.4:n.1729+122A>T
NM_012411.5:c.1729+122A>T (PTPN22)	NP_036543.4:n.1729+122A>T
NM_015967.5:c.1894+122A>T (PTPN22)	NP_057051.3:n.1894+122A>T
NM_015967.6:c.1894+122A>T (PTPN22)	NP_057051.3:n.1894+122A>T
NR_125965.1:n.414+19316T>A (AP4B1-AS1)
XM_011541221.1:c.1816+122A>T (PTPN22)	XP_011539523.1:n.1816+122A>T
XM_011541222.1:c.1894+122A>T (PTPN22)	XP_011539524.1:n.1894+122A>T
XM_011541223.1:c.1894+122A>T (PTPN22)	XP_011539525.1:n.1894+122A>T
XM_011541224.1:c.1450+122A>T (PTPN22)	XP_011539526.1:n.1450+122A>T
XM_011541225.1:c.1822+122A>T (PTPN22)	XP_011539527.1:n.1822+122A>T
XM_011541223.2:c.1894+122A>T (PTPN22)	XP_011539525.1:n.1894+122A>T
XM_011541225.2:c.1822+122A>T (PTPN22)	XP_011539527.1:n.1822+122A>T
XM_017001004.1:c.1894+122A>T (PTPN22)	XP_016856493.1:n.1894+122A>T
XM_017001005.2:c.1549+122A>T (PTPN22)	XP_016856494.1:n.1549+122A>T
NM_015967.7:c.1894+122A>T (PTPN22)	NP_057051.3:n.1894+122A>T
NM_015967.8:c.1894+122A>T (PTPN22) MANE Select	NP_057051.4:n.1894+122A>T