Canonical Allele Identifier: CA891842811
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 567801
ClinVar RCV Id: RCV000687979
dbSNP Id: rs1562629003

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987093del , CM000669.2:g.5987093del GRCh38
NC_000007.13:g.6026724del , CM000669.1:g.6026724del GRCh37
NC_000007.12:g.5993250del NCBI36
NG_008466.1:g.27014del , LRG_161:g.27014del

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1068del ENSP00000514615.2:n.*1068del
ENST00000699840.2:c.1669del ENSP00000514638.2:p.Thr557ProfsTer?
ENST00000699930.2:c.1564del ENSP00000514695.2:p.Thr522ProfsTer?
ENST00000406569.8:c.1672del ENSP00000514464.1:p.Thr558ProfsTer3
ENST00000644110.2:c.*1266del ENSP00000496392.2:n.*1266del
ENST00000699752.1:c.1516del ENSP00000514561.1:p.Thr506ProfsTer?
ENST00000699753.1:c.*1093del ENSP00000514562.1:n.*1093del
ENST00000699754.1:c.1474del ENSP00000514563.1:p.Thr492ProfsTer?
ENST00000699755.1:c.*1071del ENSP00000514564.1:n.*1071del
ENST00000699756.1:c.*1259del ENSP00000514565.1:n.*1259del
ENST00000699757.1:c.*929del ENSP00000514566.1:n.*929del
ENST00000699758.1:c.*929del ENSP00000514567.1:n.*929del
ENST00000699759.1:n.2526del
ENST00000699760.1:c.1354del ENSP00000514568.1:p.Thr452ProfsTer?
ENST00000699761.1:c.1267del ENSP00000514569.1:p.Thr423ProfsTer?
ENST00000699762.1:c.1099del ENSP00000514570.1:p.Thr367ProfsTer?
ENST00000699763.1:c.*762del ENSP00000514571.1:n.*762del
ENST00000699764.1:c.1583del ENSP00000514572.1:p.Tyr528SerfsTer?
ENST00000699765.1:c.*768del ENSP00000514573.1:n.*768del
ENST00000699766.1:c.1672del ENSP00000514574.1:p.Thr558ProfsTer?
ENST00000699767.1:c.1672del ENSP00000514575.1:p.Thr558ProfsTer?
ENST00000699768.1:c.1672del ENSP00000514576.1:p.Thr558ProfsTer?
ENST00000699811.1:c.1267del ENSP00000514614.1:p.Thr423ProfsTer?
ENST00000699813.1:n.1785del
ENST00000699814.1:c.1295del
ENST00000699815.1:c.*1203del ENSP00000514616.1:n.*1203del
ENST00000699816.1:c.*562del ENSP00000514617.1:n.*562del
ENST00000699817.1:c.*1266del ENSP00000514618.1:n.*1266del
ENST00000699818.1:c.1267del ENSP00000514619.1:p.Thr423ProfsTer?
ENST00000699819.1:c.*829del ENSP00000514620.1:n.*829del
ENST00000699820.1:c.1144+2707del ENSP00000514621.1:n.1144+2707del
ENST00000699821.1:c.1267del ENSP00000514622.1:p.Thr423ProfsTer?
ENST00000699822.1:c.*1124del ENSP00000514623.1:n.*1124del
ENST00000699823.1:c.1267del ENSP00000514624.1:p.Thr423ProfsTer?
ENST00000699824.1:c.*1175del ENSP00000514625.1:n.*1175del
ENST00000699825.1:c.1111del ENSP00000514626.1:p.Thr371ProfsTer?
ENST00000699826.1:c.*1071del ENSP00000514627.1:n.*1071del
ENST00000699827.1:c.1504del ENSP00000514628.1:p.Thr502ProfsTer?
ENST00000699828.1:c.*762del ENSP00000514629.1:n.*762del
ENST00000699833.1:n.3444del
ENST00000699837.1:c.1267del ENSP00000514635.1:p.Thr423ProfsTer?
ENST00000699838.1:c.*1572del ENSP00000514636.1:n.*1572del
ENST00000699839.1:c.1858del ENSP00000514637.1:p.Thr620ProfsTer?
ENST00000699916.1:c.*929del ENSP00000514684.1:n.*929del
ENST00000699917.1:c.*1121del ENSP00000514685.1:n.*1121del
ENST00000699918.1:c.*1173del ENSP00000514686.1:n.*1173del
ENST00000699919.1:c.*1259del ENSP00000514687.1:n.*1259del
ENST00000699920.1:c.*1308del ENSP00000514688.1:n.*1308del
ENST00000699928.1:c.989-4102del ENSP00000514693.1:n.989-4102del
ENST00000699929.1:c.*973del ENSP00000514694.1:n.*973del
ENST00000699930.1:c.1564del ENSP00000514695.1:p.Thr522ProfsTer?
ENST00000699931.1:n.3100del
ENST00000699951.1:c.*768del ENSP00000514706.1:n.*768del
ENST00000699952.1:c.803+10233del ENSP00000514707.1:n.803+10233del
ENST00000699953.1:c.*779del ENSP00000514708.1:n.*779del
ENST00000699954.1:c.*973del ENSP00000514709.1:n.*973del
ENST00000265849.12:c.1672del MANE Select ENSP00000265849.7:p.Thr558ProfsTer?
ENST00000642292.1:c.1267del ENSP00000495524.1:p.Thr423ProfsTer?
ENST00000642456.1:c.1267del ENSP00000493814.1:p.Thr423ProfsTer?
ENST00000643595.1:c.*1071del ENSP00000494497.1:n.*1071del
ENST00000644110.1:c.1354del ENSP00000496392.1:p.Thr452ProfsTer?
ENST00000265849.11:c.1672del ENSP00000265849.7:p.Thr558ProfsTer?
ENST00000382321.5:c.804-4102del ENSP00000371758.4:n.804-4102del
ENST00000406569.7:n.1672del
ENST00000441476.6:c.1354del ENSP00000392843.2:p.Thr452ProfsTer?
ENST00000469652.1:n.63-4188del
NM_000535.5:c.1672del , LRG_161t1:c.1672del NP_000526.1:p.Thr558ProfsTer?
NR_003085.2:n.1754del
XM_006715742.2:c.1666del XP_006715805.1:p.Thr556ProfsTer?
XM_006715744.2:c.739del XP_006715807.1:p.Thr247ProfsTer?
XM_011515427.1:c.1717del XP_011513729.1:p.Thr573ProfsTer?
XM_011515428.1:c.1561del XP_011513730.1:p.Thr521ProfsTer?
XM_011515429.1:c.1354del XP_011513731.1:p.Thr452ProfsTer?
XM_011515430.1:c.1354del XP_011513732.1:p.Thr452ProfsTer?
NM_000535.6:c.1672del NP_000526.2:p.Thr558ProfsTer?
NM_001322003.1:c.1267del NP_001308932.1:p.Thr423ProfsTer?
NM_001322004.1:c.1267del NP_001308933.1:p.Thr423ProfsTer?
NM_001322005.1:c.1267del NP_001308934.1:p.Thr423ProfsTer?
NM_001322006.1:c.1516del NP_001308935.1:p.Thr506ProfsTer?
NM_001322007.1:c.1354del NP_001308936.1:p.Thr452ProfsTer?
NM_001322008.1:c.1354del NP_001308937.1:p.Thr452ProfsTer?
NM_001322009.1:c.1267del NP_001308938.1:p.Thr423ProfsTer?
NM_001322010.1:c.1111del NP_001308939.1:p.Thr371ProfsTer?
NM_001322011.1:c.739del NP_001308940.1:p.Thr247ProfsTer?
NM_001322012.1:c.739del NP_001308941.1:p.Thr247ProfsTer?
NM_001322013.1:c.1099del NP_001308942.1:p.Thr367ProfsTer?
NM_001322014.1:c.1672del NP_001308943.1:p.Thr558ProfsTer?
NM_001322015.1:c.1363del NP_001308944.1:p.Thr455ProfsTer?
NR_136154.1:n.1759del
XM_006715744.4:c.739del XP_006715807.1:p.Thr247ProfsTer?
XM_017012342.2:c.739del XP_016867831.1:p.Thr247ProfsTer?
XM_024446800.1:c.1111del XP_024302568.1:p.Thr371ProfsTer?
NM_000535.7:c.1672del MANE Select NP_000526.2:p.Thr558ProfsTer?
NM_001322003.2:c.1267del NP_001308932.1:p.Thr423ProfsTer?
NM_001322004.2:c.1267del NP_001308933.1:p.Thr423ProfsTer?
NM_001322005.2:c.1267del NP_001308934.1:p.Thr423ProfsTer?
NM_001322006.2:c.1516del NP_001308935.1:p.Thr506ProfsTer?
NM_001322008.2:c.1354del NP_001308937.1:p.Thr452ProfsTer?
NM_001322009.2:c.1267del NP_001308938.1:p.Thr423ProfsTer?
NM_001322010.2:c.1111del NP_001308939.1:p.Thr371ProfsTer?
NM_001322011.2:c.739del NP_001308940.1:p.Thr247ProfsTer?
NM_001322012.2:c.739del NP_001308941.1:p.Thr247ProfsTer?
NM_001322013.2:c.1099del NP_001308942.1:p.Thr367ProfsTer?
NM_001322014.2:c.1672del NP_001308943.1:p.Thr558ProfsTer?
NM_001322015.2:c.1363del NP_001308944.1:p.Thr455ProfsTer?
NM_001322007.2:c.1354del NP_001308936.1:p.Thr452ProfsTer?