Canonical Allele Identifier: CA8871665
Gene: SMCHD1 HGNC NCBI

Linked Data

ClinVar Variation Id: 260653
dbSNP Id: rs151311806
gnomAD v2: 18-2772321-C-T
gnomAD v3: 18-2772323-C-T
gnomAD v4: 18-2772323-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000018.10:g.2772323C>T , CM000680.2:g.2772323C>T GRCh38
NC_000018.9:g.2772321C>T , CM000680.1:g.2772321C>T GRCh37
NC_000018.8:g.2762321C>T NCBI36
NG_031972.1:g.121436C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000685656.1:n.1614C>T
ENST00000686763.1:c.*685C>T ENSP00000510263.1:n.*685C>T
ENST00000686864.1:c.1888C>T
ENST00000688342.1:c.4994C>T ENSP00000508422.1:p.Ser1665Leu
ENST00000688708.1:n.3855C>T
ENST00000688964.1:n.1826C>T
ENST00000689034.1:n.3073C>T
ENST00000693213.1:n.4324C>T
ENST00000693522.1:n.1667C>T
ENST00000320876.11:c.5126C>T MANE Select ENSP00000326603.7:p.Ser1709Leu
ENST00000642953.1:c.28C>T
ENST00000645355.1:c.1171C>T
ENST00000320876.10:c.5126C>T ENSP00000326603.6:p.Ser1709Leu
ENST00000577880.5:c.3539C>T ENSP00000463049.1:p.Ser1180Leu
ENST00000584897.5:c.2946C>T
NM_015295.2:c.5126C>T NP_056110.2:p.Ser1709Leu
XM_011525642.1:c.5126C>T XP_011523944.1:p.Ser1709Leu
XM_011525643.1:c.5126C>T XP_011523945.1:p.Ser1709Leu
XM_011525644.1:c.4742C>T XP_011523946.1:p.Ser1581Leu
XM_011525645.1:c.4562C>T XP_011523947.1:p.Ser1521Leu
XR_430039.1:n.5315C>T
XR_935054.1:n.5315C>T
XR_935055.1:n.5315C>T
XM_011525643.2:c.5126C>T XP_011523945.1:p.Ser1709Leu
XM_017025684.1:c.4562C>T XP_016881173.1:p.Ser1521Leu
XR_001753172.1:n.5315C>T
XR_001753173.1:n.5315C>T
XR_001753174.1:n.5315C>T
XR_001753175.1:n.5315C>T
XR_001753176.1:n.5315C>T
XR_001753177.1:n.5227C>T
XR_001753178.1:n.5235C>T
XR_935055.2:n.5315C>T
NM_015295.3:c.5126C>T MANE Select NP_056110.2:p.Ser1709Leu