Canonical Allele Identifier: CA7980839
Gene: CLN3 HGNC NCBI

Linked Data

ClinVar Variation Id: 791072
ClinVar RCV Id: RCV000973985
dbSNP Id: rs148782327

Genomic Alleles

HGVS Genome Assembly
NC_000016.10:g.28484055G>A , CM000678.2:g.28484055G>A GRCh38
NC_000016.9:g.28495376G>A , CM000678.1:g.28495376G>A GRCh37
NC_000016.8:g.28402877G>A NCBI36
NG_008654.2:g.13248C>T , LRG_689:g.13248C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000333496.14:c.669C>T ENSP00000329171.9:p.Ser223=
ENST00000355477.10:c.597C>T ENSP00000347660.7:p.Ser199=
ENST00000357857.14:c.579C>T ENSP00000350523.9:p.Ser193=
ENST00000359984.12:c.741C>T ENSP00000353073.9:p.Ser247=
ENST00000360019.8:c.669C>T ENSP00000353116.3:p.Ser223=
ENST00000395653.9:c.282C>T ENSP00000379014.5:p.Ser94=
ENST00000561689.6:n.1026C>T
ENST00000564091.6:c.81C>T ENSP00000454466.2:p.Ser27=
ENST00000565316.6:c.741C>T ENSP00000456117.1:p.Ser247=
ENST00000565778.6:c.372C>T ENSP00000458015.1:p.Ser124=
ENST00000566083.6:n.1199C>T
ENST00000566824.6:n.721C>T
ENST00000567963.6:c.579C>T ENSP00000455387.2:p.Ser193=
ENST00000568076.6:n.868C>T
ENST00000568422.6:c.524C>T ENSP00000455549.2:p.Ala175Val
ENST00000568452.6:n.844C>T
ENST00000568472.6:n.617C>T
ENST00000568497.6:c.-229C>T ENSP00000456414.2:n.-229C>T
ENST00000568558.6:c.444C>T ENSP00000455603.2:p.Ser148=
ENST00000569430.7:c.741C>T ENSP00000454229.1:p.Ser247=
ENST00000628023.3:c.*37C>T ENSP00000486178.1:n.*37C>T
ENST00000635861.1:c.*265C>T ENSP00000490034.1:n.*265C>T
ENST00000635887.1:c.741C>T ENSP00000490709.1:p.Ser247=
ENST00000635958.1:n.852C>T
ENST00000635973.1:c.492C>T ENSP00000490363.1:p.Ser164=
ENST00000636017.1:c.*265C>T ENSP00000490538.1:n.*265C>T
ENST00000636078.1:n.783C>T
ENST00000636147.2:c.741C>T MANE Select ENSP00000490105.1:p.Ser247=
ENST00000636172.1:c.*265C>T ENSP00000490505.1:n.*265C>T
ENST00000636228.1:c.435C>T ENSP00000489627.1:p.Ser145=
ENST00000636351.1:n.461C>T
ENST00000636503.1:c.741C>T ENSP00000489824.1:p.Ser247=
ENST00000636685.1:n.248C>T
ENST00000636766.1:c.741C>T ENSP00000489841.1:p.Ser247=
ENST00000636839.1:n.893C>T
ENST00000636853.1:n.1656C>T
ENST00000636866.1:c.741C>T ENSP00000490880.1:p.Ser247=
ENST00000636907.1:n.892C>T
ENST00000636977.1:n.1809C>T
ENST00000637050.1:n.828C>T
ENST00000637100.1:c.741C>T ENSP00000490394.1:p.Ser247=
ENST00000637107.1:c.*265C>T ENSP00000490248.1:n.*265C>T
ENST00000637184.1:c.741C>T ENSP00000489952.1:p.Ser247=
ENST00000637299.1:c.*550C>T ENSP00000489823.1:n.*550C>T
ENST00000637376.1:c.741C>T ENSP00000490758.1:p.Ser247=
ENST00000637578.1:c.*265C>T ENSP00000490206.1:n.*265C>T
ENST00000637699.1:c.524C>T ENSP00000490049.1:p.Ala175Val
ENST00000637745.1:c.80C>T
ENST00000637871.1:c.*265C>T ENSP00000490670.1:n.*265C>T
ENST00000333496.13:c.669C>T ENSP00000329171.9:p.Ser223=
ENST00000355477.9:c.524C>T ENSP00000347660.6:p.Ala175Val
ENST00000357806.11:c.444C>T ENSP00000350457.7:p.Ser148=
ENST00000357857.13:c.579C>T ENSP00000350523.9:p.Ser193=
ENST00000359984.11:c.435C>T ENSP00000353073.8:p.Ser145=
ENST00000360019.6:c.741C>T ENSP00000353116.2:p.Ser247=
ENST00000395653.8:c.441C>T ENSP00000379014.4:p.Ser147=
ENST00000561689.5:n.582C>T
ENST00000563874.5:n.2095C>T
ENST00000564574.5:n.789C>T
ENST00000565047.1:n.335C>T
ENST00000565140.5:c.524C>T ENSP00000455342.1:p.Ala175Val
ENST00000565316.5:c.741C>T ENSP00000456117.1:p.Ser247=
ENST00000565688.5:c.492C>T ENSP00000456122.1:p.Ser164=
ENST00000565778.5:c.372C>T ENSP00000458015.1:p.Ser124=
ENST00000566057.5:c.355C>T ENSP00000456693.1:n.355C>T
ENST00000566083.5:n.972C>T
ENST00000566824.5:n.790C>T
ENST00000567495.5:c.524C>T ENSP00000456013.1:p.Ala175Val
ENST00000567963.5:c.741C>T ENSP00000455387.1:p.Ser247=
ENST00000568076.5:n.524C>T
ENST00000568224.4:c.507C>T ENSP00000454253.1:p.Ser169=
ENST00000568422.5:c.377C>T ENSP00000455549.1:p.Ala126Val
ENST00000568452.5:n.741C>T
ENST00000568472.5:n.221C>T
ENST00000568497.5:c.*37C>T ENSP00000456414.1:n.*37C>T
ENST00000568558.5:c.282C>T ENSP00000455603.1:p.Ser94=
ENST00000569030.5:c.461-1383C>T ENSP00000454680.1:n.461-1383C>T
ENST00000569430.5:c.741C>T ENSP00000454229.1:p.Ser247=
ENST00000628023.2:c.*37C>T ENSP00000486178.1:n.*37C>T
ENST00000631023.2:c.741C>T ENSP00000486616.1:p.Ser247=
NM_000086.2:c.741C>T , LRG_689t1:c.741C>T NP_000077.1:p.Ser247=
NM_001042432.1:c.741C>T , LRG_689t2:c.741C>T NP_001035897.1:p.Ser247=
NM_001286104.1:c.669C>T NP_001273033.1:p.Ser223=
NM_001286105.1:c.441C>T NP_001273034.1:p.Ser147=
NM_001286109.1:c.507C>T NP_001273038.1:p.Ser169=
NM_001286110.1:c.579C>T NP_001273039.1:p.Ser193=
NM_001042432.2:c.741C>T MANE Select NP_001035897.1:p.Ser247=
NM_001286104.2:c.669C>T NP_001273033.1:p.Ser223=
NM_001286105.2:c.441C>T NP_001273034.1:p.Ser147=
NM_001286109.2:c.507C>T NP_001273038.1:p.Ser169=
NM_001286110.2:c.579C>T NP_001273039.1:p.Ser193=