Canonical Allele Identifier: CA7980643
Gene: CLN3 HGNC NCBI
ClinVar Variation:
COSMIC:
gnomAD v4:
MyVariant.info:

Genomic Alleles

HGVS Genome Assembly
NC_000016.10:g.28477624C>T , CM000678.2:g.28477624C>T GRCh38
NC_000016.9:g.28488945C>T , CM000678.1:g.28488945C>T GRCh37
NC_000016.8:g.28396446C>T NCBI36
NG_008654.2:g.19679G>A , LRG_689:g.19679G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000333496.14:c.1137G>A ENSP00000329171.9:p.Glu379=
ENST00000355477.10:c.1065G>A ENSP00000347660.7:p.Glu355=
ENST00000357857.14:c.1047G>A ENSP00000350523.9:p.Glu349=
ENST00000359984.12:c.1209G>A ENSP00000353073.9:p.Glu403=
ENST00000360019.8:c.1137G>A ENSP00000353116.3:p.Glu379=
ENST00000395653.9:c.750G>A ENSP00000379014.5:p.Glu250=
ENST00000561689.6:n.1622G>A
ENST00000564091.6:c.549G>A ENSP00000454466.2:p.Glu183=
ENST00000565316.6:c.1158G>A ENSP00000456117.1:p.Glu386=
ENST00000567963.6:c.1047G>A ENSP00000455387.2:p.Glu349=
ENST00000568076.6:n.1638G>A
ENST00000568422.6:c.*446G>A ENSP00000455549.2:n.*446G>A
ENST00000568452.6:n.1440G>A
ENST00000569430.7:c.1209G>A ENSP00000454229.1:p.Glu403=
ENST00000628023.3:c.*505G>A ENSP00000486178.1:n.*505G>A
ENST00000635861.1:c.*861G>A ENSP00000490034.1:n.*861G>A
ENST00000635887.1:c.1209G>A ENSP00000490709.1:p.Glu403=
ENST00000635958.1:n.1616G>A
ENST00000636017.1:c.*733G>A ENSP00000490538.1:n.*733G>A
ENST00000636078.1:n.1331G>A
ENST00000636147.2:c.1209G>A MANE Select ENSP00000490105.1:p.Glu403=
ENST00000636172.1:c.*733G>A ENSP00000490505.1:n.*733G>A
ENST00000636228.1:c.903G>A ENSP00000489627.1:p.Glu301=
ENST00000636351.1:n.1103G>A
ENST00000636503.1:c.*239G>A ENSP00000489824.1:n.*239G>A
ENST00000636766.1:c.1209G>A ENSP00000489841.1:p.Glu403=
ENST00000636839.1:n.1705G>A
ENST00000636853.1:n.2222G>A
ENST00000636866.1:c.*4G>A ENSP00000490880.1:n.*4G>A
ENST00000636907.1:n.1360G>A
ENST00000636977.1:n.2701G>A
ENST00000637050.1:n.1598G>A
ENST00000637100.1:c.1006-3362G>A ENSP00000490394.1:n.1006-3362G>A
ENST00000637107.1:c.*733G>A ENSP00000490248.1:n.*733G>A
ENST00000637184.1:c.*239G>A ENSP00000489952.1:n.*239G>A
ENST00000637299.1:c.*1018G>A ENSP00000489823.1:n.*1018G>A
ENST00000637376.1:c.*239G>A ENSP00000490758.1:n.*239G>A
ENST00000637378.1:c.228+4481G>A ENSP00000490831.1:n.228+4481G>A
ENST00000637578.1:c.*733G>A ENSP00000490206.1:n.*733G>A
ENST00000637699.1:c.1120G>A ENSP00000490049.1:n.1120G>A
ENST00000637745.1:c.646G>A
ENST00000637871.1:c.*907G>A ENSP00000490670.1:n.*907G>A
ENST00000638036.1:c.371G>A
ENST00000333496.13:c.1137G>A ENSP00000329171.9:p.Glu379=
ENST00000355477.9:c.*446G>A ENSP00000347660.6:n.*446G>A
ENST00000357806.11:c.912G>A ENSP00000350457.7:p.Glu304=
ENST00000357857.13:c.1047G>A ENSP00000350523.9:p.Glu349=
ENST00000359984.11:c.903G>A ENSP00000353073.8:p.Glu301=
ENST00000360019.6:c.1209G>A ENSP00000353116.2:p.Glu403=
ENST00000395653.8:c.909G>A ENSP00000379014.4:p.Glu303=
ENST00000561689.5:n.1178G>A
ENST00000563874.5:n.2737G>A
ENST00000564091.5:c.298G>A
ENST00000565140.5:c.1117G>A ENSP00000455342.1:n.1117G>A
ENST00000565316.5:c.1158G>A ENSP00000456117.1:p.Glu386=
ENST00000565354.5:n.522G>A
ENST00000566057.5:c.823G>A ENSP00000456693.1:n.823G>A
ENST00000567963.5:c.918G>A ENSP00000455387.1:p.Glu306=
ENST00000568076.5:n.1120G>A
ENST00000568224.4:c.975G>A ENSP00000454253.1:p.Glu325=
ENST00000568422.5:c.*446G>A ENSP00000455549.1:n.*446G>A
ENST00000568452.5:n.1337G>A
ENST00000569030.5:c.1001G>A ENSP00000454680.1:n.1001G>A
ENST00000569430.5:c.1209G>A ENSP00000454229.1:p.Glu403=
ENST00000628023.2:c.*505G>A ENSP00000486178.1:n.*505G>A
ENST00000631023.2:c.918G>A ENSP00000486616.1:p.Glu306=
NM_000086.2:c.1209G>A , LRG_689t1:c.1209G>A NP_000077.1:p.Glu403=
NM_001042432.1:c.1209G>A , LRG_689t2:c.1209G>A NP_001035897.1:p.Glu403=
NM_001286104.1:c.1137G>A NP_001273033.1:p.Glu379=
NM_001286105.1:c.909G>A NP_001273034.1:p.Glu303=
NM_001286109.1:c.975G>A NP_001273038.1:p.Glu325=
NM_001286110.1:c.1047G>A NP_001273039.1:p.Glu349=
NM_001042432.2:c.1209G>A MANE Select NP_001035897.1:p.Glu403=
NM_001286104.2:c.1137G>A NP_001273033.1:p.Glu379=
NM_001286105.2:c.909G>A NP_001273034.1:p.Glu303=
NM_001286109.2:c.975G>A NP_001273038.1:p.Glu325=
NM_001286110.2:c.1047G>A NP_001273039.1:p.Glu349=