Canonical Allele Identifier: CA736240320

Gene: POMGNT1 TSPAN1

Linked Data

• dbSNP Id: rs1183388338
• gnomAD v3: 1-46190095-TTC-T
• gnomAD v4: 1-46190095-TTC-T
• MyVariant Identifiers: chr1:g.46655768_46655769del (hg19) ; chr1:g.46190096_46190097del (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.46190097_46190098del , CM000663.2:g.46190097_46190098del	GRCh38
NC_000001.10:g.46655769_46655770del , CM000663.1:g.46655769_46655770del	GRCh37
NC_000001.9:g.46428356_46428357del	NCBI36
NG_009205.2:g.35209_35210del
NG_009205.3:g.35209_35210del

Transcript Alleles

HGVS	Amino-acid Change
ENST00000396420.8:c.1650-108_1650-107del (POMGNT1)	ENSP00000379698.4:n.1650-108_1650-107del
ENST00000497439.6:n.1822-108_1822-107del (POMGNT1)
ENST00000684817.1:n.2010-108_2010-107del (POMGNT1)
ENST00000684898.1:n.2212-108_2212-107del (POMGNT1)
ENST00000685230.1:c.*960-108_*960-107del (POMGNT1)	ENSP00000510305.1:n.*960-108_*960-107del
ENST00000685275.1:n.2197-108_2197-107del (POMGNT1)
ENST00000685444.1:c.1551-108_1551-107del (POMGNT1)	ENSP00000510762.1:n.1551-108_1551-107del
ENST00000685704.1:n.2316-108_2316-107del (POMGNT1)
ENST00000685833.1:n.4043-108_4043-107del (POMGNT1)
ENST00000686252.1:n.2724-108_2724-107del (POMGNT1)
ENST00000686379.1:c.*774-108_*774-107del (POMGNT1)	ENSP00000508913.1:n.*774-108_*774-107del
ENST00000686724.1:n.3337-108_3337-107del (POMGNT1)
ENST00000686737.1:c.1650-108_1650-107del (POMGNT1)	ENSP00000508736.1:n.1650-108_1650-107del
ENST00000687112.1:n.2516-108_2516-107del (POMGNT1)
ENST00000687149.1:c.1689-108_1689-107del (POMGNT1)	ENSP00000509745.1:n.1689-108_1689-107del
ENST00000687197.1:c.*590-108_*590-107del (POMGNT1)	ENSP00000510749.1:n.*590-108_*590-107del
ENST00000687235.1:n.3727-108_3727-107del (POMGNT1)
ENST00000687613.1:n.2290-108_2290-107del (POMGNT1)
ENST00000687683.1:c.1650-108_1650-107del (POMGNT1)	ENSP00000508522.1:n.1650-108_1650-107del
ENST00000688032.1:n.2187-108_2187-107del (POMGNT1)
ENST00000688596.1:n.2301-108_2301-107del (POMGNT1)
ENST00000688608.1:c.1551-108_1551-107del (POMGNT1)	ENSP00000508890.1:n.1551-108_1551-107del
ENST00000689031.1:n.2102-108_2102-107del (POMGNT1)
ENST00000689756.1:c.*1282-108_*1282-107del (POMGNT1)	ENSP00000509023.1:n.*1282-108_*1282-107del
ENST00000690377.1:n.1997-108_1997-107del (POMGNT1)
ENST00000690678.1:c.1650-108_1650-107del (POMGNT1)	ENSP00000508703.1:n.1650-108_1650-107del
ENST00000691209.1:c.*590-108_*590-107del (POMGNT1)	ENSP00000510112.1:n.*590-108_*590-107del
ENST00000691243.1:c.*41-108_*41-107del (POMGNT1)	ENSP00000510654.1:n.*41-108_*41-107del
ENST00000692202.1:n.2225-108_2225-107del (POMGNT1)
ENST00000692322.1:c.*1437-108_*1437-107del (POMGNT1)	ENSP00000509017.1:n.*1437-108_*1437-107del
ENST00000692369.1:c.1650-108_1650-107del (POMGNT1)	ENSP00000508453.1:n.1650-108_1650-107del
ENST00000692599.1:n.3525-108_3525-107del (POMGNT1)
ENST00000692635.1:c.*525-108_*525-107del (POMGNT1)	ENSP00000508425.1:n.*525-108_*525-107del
ENST00000693168.1:n.3426-108_3426-107del (POMGNT1)
ENST00000693218.1:c.*211-108_*211-107del (POMGNT1)	ENSP00000510577.1:n.*211-108_*211-107del
ENST00000693223.1:n.2598-108_2598-107del (POMGNT1)
ENST00000371984.8:c.1650-108_1650-107del (POMGNT1) MANE Select	ENSP00000361052.3:n.1650-108_1650-107del
ENST00000371984.7:c.1650-108_1650-107del (POMGNT1)	ENSP00000361052.3:n.1650-108_1650-107del
ENST00000371992.1:c.1650-108_1650-107del (POMGNT1)	ENSP00000361060.1:n.1650-108_1650-107del
ENST00000396420.7:c.*1319-108_*1319-107del (POMGNT1)	ENSP00000379698.3:n.*1319-108_*1319-107del
ENST00000480972.1:n.299-108_299-107del (POMGNT1)
NM_001243766.1:c.1650-108_1650-107del (POMGNT1)	NP_001230695.1:n.1650-108_1650-107del
NM_001290129.1:c.1584-108_1584-107del (POMGNT1)	NP_001277058.1:n.1584-108_1584-107del
NM_001290130.1:c.1221-108_1221-107del (POMGNT1)	NP_001277059.1:n.1221-108_1221-107del
NM_017739.3:c.1650-108_1650-107del (POMGNT1)	NP_060209.3:n.1650-108_1650-107del
XM_005271010.1:c.1650-108_1650-107del (POMGNT1)	XP_005271067.1:n.1650-108_1650-107del
XM_006710755.1:c.1650-108_1650-107del (POMGNT1)	XP_006710818.1:n.1650-108_1650-107del
XM_006710756.1:c.1650-108_1650-107del (POMGNT1)	XP_006710819.1:n.1650-108_1650-107del
XM_011540460.1:c.678+4789_678+4790del (TSPAN1)	XP_011538762.1:n.678+4789_678+4790del
XM_011540461.1:c.633+4789_633+4790del (TSPAN1)	XP_011538763.1:n.633+4789_633+4790del
XM_011541759.1:c.1584-108_1584-107del (POMGNT1)	XP_011540061.1:n.1584-108_1584-107del
XM_011541760.1:c.1584-108_1584-107del (POMGNT1)	XP_011540062.1:n.1584-108_1584-107del
XM_011541761.1:c.558-108_558-107del (POMGNT1)	XP_011540063.1:n.558-108_558-107del
XM_011540460.3:c.678+4789_678+4790del (TSPAN1)	XP_011538762.1:n.678+4789_678+4790del
XM_011541760.3:c.1584-108_1584-107del (POMGNT1)	XP_011540062.1:n.1584-108_1584-107del
XM_017001690.1:c.1650-108_1650-107del (POMGNT1)	XP_016857179.1:n.1650-108_1650-107del
NM_001243766.2:c.1650-108_1650-107del (POMGNT1)	NP_001230695.2:n.1650-108_1650-107del
NM_001290129.2:c.1584-108_1584-107del (POMGNT1)	NP_001277058.2:n.1584-108_1584-107del
NM_001290130.2:c.1221-108_1221-107del (POMGNT1)	NP_001277059.2:n.1221-108_1221-107del
NM_017739.4:c.1650-108_1650-107del (POMGNT1) MANE Select	NP_060209.4:n.1650-108_1650-107del