Canonical Allele Identifier: CA670068
Gene: HSPG2 HGNC NCBI

Linked Data

ClinVar Variation Id: 295732
dbSNP Id: rs372760688
gnomAD v2: 1-22161274-C-T
gnomAD v3: 1-21834781-C-T
gnomAD v4: 1-21834781-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.21834781C>T , CM000663.2:g.21834781C>T GRCh38
NC_000001.10:g.22161274C>T , CM000663.1:g.22161274C>T GRCh37
NC_000001.9:g.22033861C>T NCBI36
NG_016740.1:g.107477G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000374695.8:c.10618G>A MANE Select ENSP00000363827.3:p.Val3540Ile
ENST00000374695.7:c.10618G>A ENSP00000363827.3:p.Val3540Ile
ENST00000471322.2:n.973G>A
NM_001291860.1:c.10621G>A NP_001278789.1:p.Val3541Ile
NM_005529.6:c.10618G>A NP_005520.4:p.Val3540Ile
XM_006710594.2:c.11164G>A XP_006710657.1:p.Val3722Ile
XM_006710595.2:c.11116G>A XP_006710658.1:p.Val3706Ile
XM_006710596.2:c.11095G>A XP_006710659.1:p.Val3699Ile
XM_006710597.2:c.10618G>A XP_006710660.1:p.Val3540Ile
XM_011541317.1:c.11167G>A XP_011539619.1:p.Val3723Ile
XM_011541318.1:c.11167G>A XP_011539620.1:p.Val3723Ile
XM_011541319.1:c.11167G>A XP_011539621.1:p.Val3723Ile
XM_011541320.1:c.10888G>A XP_011539622.1:p.Val3630Ile
XM_011541321.1:c.10672G>A XP_011539623.1:p.Val3558Ile
XM_011541318.2:c.11167G>A XP_011539620.1:p.Val3723Ile
XM_017001120.1:c.10813G>A XP_016856609.1:p.Val3605Ile
XM_017001121.1:c.10762G>A XP_016856610.1:p.Val3588Ile
XM_017001122.1:c.10759G>A XP_016856611.1:p.Val3587Ile
NM_005529.7:c.10618G>A MANE Select NP_005520.4:p.Val3540Ile
NM_001291860.2:c.10621G>A NP_001278789.1:p.Val3541Ile