Canonical Allele Identifier: CA59789403
Gene: SCN9A HGNC NCBI
SCN1A-AS1 HGNC NCBI

Linked Data

ClinVar Variation Id: 2952426
ClinVar RCV Id: RCV003815577
dbSNP Id: rs1042977592

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.166204346A>G , CM000664.2:g.166204346A>G GRCh38
NC_000002.11:g.167060856A>G , CM000664.1:g.167060856A>G GRCh37
NC_000002.10:g.166769102A>G NCBI36
NG_012798.1:g.176642T>C , LRG_369:g.176642T>C

Transcript Alleles

HGVS Amino-acid Change
ENST00000303354.11:c.4503+14T>C (SCN9A) ENSP00000304748.7:n.4503+14T>C
ENST00000409435.6:c.4503+14T>C (SCN9A) ENSP00000386330.2:n.4503+14T>C
ENST00000642356.2:c.4503+14T>C (SCN9A) MANE Select ENSP00000495601.1:n.4503+14T>C
ENST00000644316.1:c.4347+14T>C (SCN9A) ENSP00000493939.1:n.4347+14T>C
ENST00000645907.1:c.4470+14T>C (SCN9A) ENSP00000495983.1:n.4470+14T>C
ENST00000646694.1:n.880+14T>C (SCN9A)
ENST00000303354.10:c.4503+14T>C (SCN9A) ENSP00000304748.7:n.4503+14T>C
ENST00000409435.5:c.4503+14T>C (SCN9A) ENSP00000386330.1:n.4503+14T>C
ENST00000409672.5:c.4470+14T>C (SCN9A) ENSP00000386306.1:n.4470+14T>C
NM_002977.3:c.4470+14T>C , LRG_369t1:c.4470+14T>C (SCN9A) NP_002968.1:n.4470+14T>C
NR_110260.1:n.611+4528A>G (SCN1A-AS1)
XM_005246757.1:c.4503+14T>C (SCN9A) XP_005246814.1:n.4503+14T>C
XM_011511616.1:c.4503+14T>C (SCN9A) XP_011509918.1:n.4503+14T>C
XM_011511617.1:c.4503+14T>C (SCN9A) XP_011509919.1:n.4503+14T>C
XM_011511618.1:c.4470+14T>C (SCN9A) XP_011509920.1:n.4470+14T>C
XM_011511619.1:c.4503+14T>C (SCN9A) XP_011509921.1:n.4503+14T>C
NM_001365536.1:c.4503+14T>C (SCN9A) MANE Select NP_001352465.1:n.4503+14T>C
XM_011511616.3:c.4503+14T>C (SCN9A) XP_011509918.1:n.4503+14T>C
XM_011511617.2:c.4503+14T>C (SCN9A) XP_011509919.1:n.4503+14T>C
XM_011511618.2:c.4470+14T>C (SCN9A) XP_011509920.1:n.4470+14T>C
XM_011511619.2:c.4503+14T>C (SCN9A) XP_011509921.1:n.4503+14T>C
XM_017004668.1:c.4116+14T>C (SCN9A) XP_016860157.1:n.4116+14T>C
XM_017004669.1:c.3759+14T>C (SCN9A) XP_016860158.1:n.3759+14T>C