Canonical Allele Identifier: CA597123
Gene: CLCN6 HGNC NCBI
NPPA-AS1 HGNC NCBI
NPPA HGNC NCBI

Linked Data

ClinVar Variation Id: 1406460
ClinVar RCV Id: RCV001915835
dbSNP Id: rs138410047
ExAC: 1:11907681 C / T
gnomAD v2: 1-11907681-C-T
gnomAD v3: 1-11847624-C-T
gnomAD v4: 1-11847624-C-T
MyVariant Identifiers: chr1:g.11907681C>T (hg19) chr1:g.11847624C>T (hg38)
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Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.11847624C>T , CM000663.2:g.11847624C>T GRCh38
NC_000001.10:g.11907681C>T , CM000663.1:g.11907681C>T GRCh37
NC_000001.9:g.11830268C>T NCBI36
NG_012926.1:g.5160G>A , LRG_751:g.5160G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000400892.3:c.*2009C>T (CLCN6) ENSP00000496938.1:n.*2009C>T
ENST00000446542.5:n.972C>T (NPPA-AS1)
ENST00000376476.1:c.-27-185G>A (NPPA) ENSP00000365659.1:n.-27-185G>A
ENST00000376480.7:c.61G>A (NPPA) MANE Select ENSP00000365663.3:p.Gly21Ser
ENST00000610706.1:c.61G>A (NPPA) ENSP00000483195.1:p.Gly21Ser
NM_006172.3:c.61G>A , LRG_751t1:c.61G>A (NPPA) NP_006163.1:p.Gly21Ser
NM_006172.4:c.61G>A (NPPA) MANE Select NP_006163.1:p.Gly21Ser
Search 100 bp 5'
Search 100 bp 3'