Canonical Allele Identifier: CA553867
Gene: NPHP4 HGNC NCBI

Linked Data

ClinVar Variation Id: 497873
dbSNP Id: rs146948888
gnomAD v2: 1-5935038-C-T
gnomAD v3: 1-5874978-C-T
gnomAD v4: 1-5874978-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.5874978C>T , CM000663.2:g.5874978C>T GRCh38
NC_000001.10:g.5935038C>T , CM000663.1:g.5935038C>T GRCh37
NC_000001.9:g.5857625C>T NCBI36
NG_011724.2:g.122494G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000378156.9:c.2940G>A MANE Select ENSP00000367398.4:p.Thr980=
ENST00000378156.8:c.2940G>A ENSP00000367398.4:p.Thr980=
ENST00000378169.7:c.*1841G>A ENSP00000367411.3:n.*1841G>A
ENST00000478423.6:n.2672G>A
ENST00000489180.6:c.*751G>A ENSP00000423747.1:n.*751G>A
ENST00000506941.1:n.497G>A
NM_001291593.1:c.1401G>A NP_001278522.1:p.Thr467=
NM_001291594.1:c.1404G>A NP_001278523.1:p.Thr468=
NM_015102.4:c.2940G>A NP_055917.1:p.Thr980=
NR_111987.1:n.3755G>A
XM_006710563.2:c.2940G>A XP_006710626.1:p.Thr980=
XM_006710565.2:c.2940G>A XP_006710628.1:p.Thr980=
XM_011541213.1:c.2937G>A XP_011539515.1:p.Thr979=
XM_011541214.1:c.2898G>A XP_011539516.1:p.Thr966=
XM_011541215.1:c.2829G>A XP_011539517.1:p.Thr943=
XM_011541216.1:c.2940G>A XP_011539518.1:p.Thr980=
XM_011541217.1:c.2940G>A XP_011539519.1:p.Thr980=
XM_011541218.1:c.2940G>A XP_011539520.1:p.Thr980=
XM_011541219.1:c.2886G>A XP_011539521.1:p.Thr962=
XM_011541220.1:c.2940G>A XP_011539522.1:p.Thr980=
XR_946604.1:n.2978G>A
XM_006710563.3:c.2940G>A XP_006710626.1:p.Thr980=
XM_011541216.2:c.2940G>A XP_011539518.1:p.Thr980=
XM_011541217.2:c.2940G>A XP_011539519.1:p.Thr980=
XM_011541218.2:c.2940G>A XP_011539520.1:p.Thr980=
XM_017000996.1:c.2895G>A XP_016856485.1:p.Thr965=
XM_017000997.1:c.2940G>A XP_016856486.1:p.Thr980=
XM_017000998.1:c.2940G>A XP_016856487.1:p.Thr980=
XM_017000999.1:c.2412G>A XP_016856488.1:p.Thr804=
XM_017001000.2:c.2412G>A XP_016856489.1:p.Thr804=
XM_017001001.1:c.2142G>A XP_016856490.1:p.Thr714=
XM_017001003.1:c.1401G>A XP_016856492.1:p.Thr467=
XR_001737114.1:n.2978G>A
XR_001737115.1:n.2978G>A
NM_015102.5:c.2940G>A MANE Select NP_055917.1:p.Thr980=
NM_001291593.2:c.1401G>A NP_001278522.1:p.Thr467=
NM_001291594.2:c.1404G>A NP_001278523.1:p.Thr468=
NR_111987.2:n.3707G>A