Canonical Allele Identifier: CA553855
Gene: NPHP4 HGNC NCBI

Linked Data

ClinVar Variation Id: 290383
dbSNP Id: rs373285520
gnomAD v2: 1-5935014-G-A
gnomAD v3: 1-5874954-G-A
gnomAD v4: 1-5874954-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.5874954G>A , CM000663.2:g.5874954G>A GRCh38
NC_000001.10:g.5935014G>A , CM000663.1:g.5935014G>A GRCh37
NC_000001.9:g.5857601G>A NCBI36
NG_011724.2:g.122518C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000378156.9:c.2964C>T MANE Select ENSP00000367398.4:p.Ala988=
ENST00000378156.8:c.2964C>T ENSP00000367398.4:p.Ala988=
ENST00000378169.7:c.*1865C>T ENSP00000367411.3:n.*1865C>T
ENST00000478423.6:n.2696C>T
ENST00000489180.6:c.*775C>T ENSP00000423747.1:n.*775C>T
ENST00000506941.1:n.521C>T
NM_001291593.1:c.1425C>T NP_001278522.1:p.Ala475=
NM_001291594.1:c.1428C>T NP_001278523.1:p.Ala476=
NM_015102.4:c.2964C>T NP_055917.1:p.Ala988=
NR_111987.1:n.3779C>T
XM_006710563.2:c.2964C>T XP_006710626.1:p.Ala988=
XM_006710565.2:c.2964C>T XP_006710628.1:p.Ala988=
XM_011541213.1:c.2961C>T XP_011539515.1:p.Ala987=
XM_011541214.1:c.2922C>T XP_011539516.1:p.Ala974=
XM_011541215.1:c.2853C>T XP_011539517.1:p.Ala951=
XM_011541216.1:c.2964C>T XP_011539518.1:p.Ala988=
XM_011541217.1:c.2964C>T XP_011539519.1:p.Ala988=
XM_011541218.1:c.2964C>T XP_011539520.1:p.Ala988=
XM_011541219.1:c.2910C>T XP_011539521.1:p.Ala970=
XM_011541220.1:c.2964C>T XP_011539522.1:p.Ala988=
XR_946604.1:n.3002C>T
XM_006710563.3:c.2964C>T XP_006710626.1:p.Ala988=
XM_011541216.2:c.2964C>T XP_011539518.1:p.Ala988=
XM_011541217.2:c.2964C>T XP_011539519.1:p.Ala988=
XM_011541218.2:c.2964C>T XP_011539520.1:p.Ala988=
XM_017000996.1:c.2919C>T XP_016856485.1:p.Ala973=
XM_017000997.1:c.2964C>T XP_016856486.1:p.Ala988=
XM_017000998.1:c.2964C>T XP_016856487.1:p.Ala988=
XM_017000999.1:c.2436C>T XP_016856488.1:p.Ala812=
XM_017001000.2:c.2436C>T XP_016856489.1:p.Ala812=
XM_017001001.1:c.2166C>T XP_016856490.1:p.Ala722=
XM_017001003.1:c.1425C>T XP_016856492.1:p.Ala475=
XR_001737114.1:n.3002C>T
XR_001737115.1:n.3002C>T
NM_015102.5:c.2964C>T MANE Select NP_055917.1:p.Ala988=
NM_001291593.2:c.1425C>T NP_001278522.1:p.Ala475=
NM_001291594.2:c.1428C>T NP_001278523.1:p.Ala476=
NR_111987.2:n.3731C>T