Canonical Allele Identifier: CA553770
Gene: NPHP4 HGNC NCBI

Linked Data

ClinVar Variation Id: 502319
dbSNP Id: rs202004152
gnomAD v2: 1-5934587-C-T
gnomAD v3: 1-5874527-C-T
gnomAD v4: 1-5874527-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.5874527C>T , CM000663.2:g.5874527C>T GRCh38
NC_000001.10:g.5934587C>T , CM000663.1:g.5934587C>T GRCh37
NC_000001.9:g.5857174C>T NCBI36
NG_011724.2:g.122945G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000378156.9:c.3175G>A MANE Select ENSP00000367398.4:p.Ala1059Thr
ENST00000378156.8:c.3175G>A ENSP00000367398.4:p.Ala1059Thr
ENST00000378169.7:c.*2076G>A ENSP00000367411.3:n.*2076G>A
ENST00000478423.6:n.2907G>A
ENST00000489180.6:c.*986G>A ENSP00000423747.1:n.*986G>A
NM_001291593.1:c.1636G>A NP_001278522.1:p.Ala546Thr
NM_001291594.1:c.1639G>A NP_001278523.1:p.Ala547Thr
NM_015102.4:c.3175G>A NP_055917.1:p.Ala1059Thr
NR_111987.1:n.3990G>A
XM_006710563.2:c.3175G>A XP_006710626.1:p.Ala1059Thr
XM_006710565.2:c.3175G>A XP_006710628.1:p.Ala1059Thr
XM_011541213.1:c.3172G>A XP_011539515.1:p.Ala1058Thr
XM_011541214.1:c.3133G>A XP_011539516.1:p.Ala1045Thr
XM_011541215.1:c.3064G>A XP_011539517.1:p.Ala1022Thr
XM_011541216.1:c.3175G>A XP_011539518.1:p.Ala1059Thr
XM_011541217.1:c.3175G>A XP_011539519.1:p.Ala1059Thr
XM_011541218.1:c.3175G>A XP_011539520.1:p.Ala1059Thr
XM_011541219.1:c.3121G>A XP_011539521.1:p.Ala1041Thr
XM_011541220.1:c.3175G>A XP_011539522.1:p.Ala1059Thr
XR_946604.1:n.3082+347G>A
XM_006710563.3:c.3175G>A XP_006710626.1:p.Ala1059Thr
XM_011541216.2:c.3175G>A XP_011539518.1:p.Ala1059Thr
XM_011541217.2:c.3175G>A XP_011539519.1:p.Ala1059Thr
XM_011541218.2:c.3175G>A XP_011539520.1:p.Ala1059Thr
XM_017000996.1:c.3130G>A XP_016856485.1:p.Ala1044Thr
XM_017000997.1:c.3175G>A XP_016856486.1:p.Ala1059Thr
XM_017000998.1:c.3175G>A XP_016856487.1:p.Ala1059Thr
XM_017000999.1:c.2647G>A XP_016856488.1:p.Ala883Thr
XM_017001000.2:c.2647G>A XP_016856489.1:p.Ala883Thr
XM_017001001.1:c.2377G>A XP_016856490.1:p.Ala793Thr
XM_017001003.1:c.1636G>A XP_016856492.1:p.Ala546Thr
XR_001737114.1:n.3213G>A
XR_001737115.1:n.3082+347G>A
NM_015102.5:c.3175G>A MANE Select NP_055917.1:p.Ala1059Thr
NM_001291593.2:c.1636G>A NP_001278522.1:p.Ala546Thr
NM_001291594.2:c.1639G>A NP_001278523.1:p.Ala547Thr
NR_111987.2:n.3942G>A