Canonical Allele Identifier: CA553641
Gene: NPHP4 HGNC NCBI

Linked Data

ClinVar Variation Id: 501521
dbSNP Id: rs188869698
gnomAD v2: 1-5927912-G-A
gnomAD v3: 1-5867852-G-A
gnomAD v4: 1-5867852-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.5867852G>A , CM000663.2:g.5867852G>A GRCh38
NC_000001.10:g.5927912G>A , CM000663.1:g.5927912G>A GRCh37
NC_000001.9:g.5850499G>A NCBI36
NG_011724.2:g.129620C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000378156.9:c.3360C>T MANE Select ENSP00000367398.4:p.Cys1120=
ENST00000378156.8:c.3360C>T ENSP00000367398.4:p.Cys1120=
ENST00000378161.5:n.524C>T
ENST00000378169.7:c.*2261C>T ENSP00000367411.3:n.*2261C>T
ENST00000468253.1:n.635C>T
ENST00000478423.6:n.3092C>T
ENST00000489180.6:c.*1171C>T ENSP00000423747.1:n.*1171C>T
NM_001291593.1:c.1821C>T NP_001278522.1:p.Cys607=
NM_001291594.1:c.1824C>T NP_001278523.1:p.Cys608=
NM_015102.4:c.3360C>T NP_055917.1:p.Cys1120=
NR_111987.1:n.4175C>T
XM_006710563.2:c.3360C>T XP_006710626.1:p.Cys1120=
XM_006710565.2:c.3360C>T XP_006710628.1:p.Cys1120=
XM_011541213.1:c.3357C>T XP_011539515.1:p.Cys1119=
XM_011541214.1:c.3318C>T XP_011539516.1:p.Cys1106=
XM_011541215.1:c.3249C>T XP_011539517.1:p.Cys1083=
XM_011541216.1:c.3360C>T XP_011539518.1:p.Cys1120=
XM_011541217.1:c.3360C>T XP_011539519.1:p.Cys1120=
XM_011541218.1:c.3360C>T XP_011539520.1:p.Cys1120=
XM_011541219.1:c.3306C>T XP_011539521.1:p.Cys1102=
XM_011541220.1:c.3360C>T XP_011539522.1:p.Cys1120=
XR_946604.1:n.3211C>T
XM_006710563.3:c.3360C>T XP_006710626.1:p.Cys1120=
XM_011541216.2:c.3360C>T XP_011539518.1:p.Cys1120=
XM_011541217.2:c.3360C>T XP_011539519.1:p.Cys1120=
XM_011541218.2:c.3360C>T XP_011539520.1:p.Cys1120=
XM_017000996.1:c.3315C>T XP_016856485.1:p.Cys1105=
XM_017000997.1:c.3360C>T XP_016856486.1:p.Cys1120=
XM_017000998.1:c.3360C>T XP_016856487.1:p.Cys1120=
XM_017000999.1:c.2832C>T XP_016856488.1:p.Cys944=
XM_017001000.2:c.2832C>T XP_016856489.1:p.Cys944=
XM_017001001.1:c.2562C>T XP_016856490.1:p.Cys854=
XM_017001003.1:c.1821C>T XP_016856492.1:p.Cys607=
XR_001737114.1:n.3398C>T
XR_001737115.1:n.3211C>T
NM_015102.5:c.3360C>T MANE Select NP_055917.1:p.Cys1120=
NM_001291593.2:c.1821C>T NP_001278522.1:p.Cys607=
NM_001291594.2:c.1824C>T NP_001278523.1:p.Cys608=
NR_111987.2:n.4127C>T