Canonical Allele Identifier: CA553588
Gene: NPHP4 HGNC NCBI

Linked Data

ClinVar Variation Id: 498957
dbSNP Id: rs373955397
gnomAD v2: 1-5927168-C-T
gnomAD v3: 1-5867108-C-T
gnomAD v4: 1-5867108-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.5867108C>T , CM000663.2:g.5867108C>T GRCh38
NC_000001.10:g.5927168C>T , CM000663.1:g.5927168C>T GRCh37
NC_000001.9:g.5849755C>T NCBI36
NG_011724.2:g.130364G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000378156.9:c.3480G>A MANE Select ENSP00000367398.4:p.Pro1160=
ENST00000378156.8:c.3480G>A ENSP00000367398.4:p.Pro1160=
ENST00000378161.5:n.644G>A
ENST00000378169.7:c.*2381G>A ENSP00000367411.3:n.*2381G>A
ENST00000460696.1:n.545G>A
ENST00000468253.1:n.755G>A
ENST00000478423.6:n.3212G>A
ENST00000489180.6:c.*1291G>A ENSP00000423747.1:n.*1291G>A
NM_001291593.1:c.1941G>A NP_001278522.1:p.Pro647=
NM_001291594.1:c.1944G>A NP_001278523.1:p.Pro648=
NM_015102.4:c.3480G>A NP_055917.1:p.Pro1160=
NR_111987.1:n.4295G>A
XM_006710563.2:c.3480G>A XP_006710626.1:p.Pro1160=
XM_006710565.2:c.3480G>A XP_006710628.1:p.Pro1160=
XM_011541213.1:c.3477G>A XP_011539515.1:p.Pro1159=
XM_011541214.1:c.3438G>A XP_011539516.1:p.Pro1146=
XM_011541215.1:c.3369G>A XP_011539517.1:p.Pro1123=
XM_011541216.1:c.3480G>A XP_011539518.1:p.Pro1160=
XM_011541217.1:c.3480G>A XP_011539519.1:p.Pro1160=
XM_011541218.1:c.3480G>A XP_011539520.1:p.Pro1160=
XM_011541219.1:c.3426G>A XP_011539521.1:p.Pro1142=
XM_011541220.1:c.3480G>A XP_011539522.1:p.Pro1160=
XR_946604.1:n.3331G>A
XM_006710563.3:c.3480G>A XP_006710626.1:p.Pro1160=
XM_011541216.2:c.3480G>A XP_011539518.1:p.Pro1160=
XM_011541217.2:c.3480G>A XP_011539519.1:p.Pro1160=
XM_011541218.2:c.3480G>A XP_011539520.1:p.Pro1160=
XM_017000996.1:c.3435G>A XP_016856485.1:p.Pro1145=
XM_017000997.1:c.3480G>A XP_016856486.1:p.Pro1160=
XM_017000998.1:c.3480G>A XP_016856487.1:p.Pro1160=
XM_017000999.1:c.2952G>A XP_016856488.1:p.Pro984=
XM_017001000.2:c.2952G>A XP_016856489.1:p.Pro984=
XM_017001001.1:c.2682G>A XP_016856490.1:p.Pro894=
XM_017001003.1:c.1941G>A XP_016856492.1:p.Pro647=
XR_001737114.1:n.3518G>A
XR_001737115.1:n.3331G>A
NM_015102.5:c.3480G>A MANE Select NP_055917.1:p.Pro1160=
NM_001291593.2:c.1941G>A NP_001278522.1:p.Pro647=
NM_001291594.2:c.1944G>A NP_001278523.1:p.Pro648=
NR_111987.2:n.4247G>A