Canonical Allele Identifier: CA5121684
Gene: SPTLC1 HGNC NCBI

Linked Data

ClinVar Variation Id: 916857
dbSNP Id: rs376799813
gnomAD v2: 9-94874863-C-G
gnomAD v3: 9-92112581-C-G
gnomAD v4: 9-92112581-C-G

Genomic Alleles

HGVS Genome Assembly
NC_000009.12:g.92112581C>G , CM000671.2:g.92112581C>G GRCh38
NC_000009.11:g.94874863C>G , CM000671.1:g.94874863C>G GRCh37
NC_000009.10:g.93914684C>G NCBI36
NG_007950.1:g.7828G>C , LRG_272:g.7828G>C

Transcript Alleles

HGVS Amino-acid Change
ENST00000461132.2:c.58-19G>C ENSP00000509096.1:n.58-19G>C
ENST00000482632.6:n.468-19G>C
ENST00000488921.6:c.*74-19G>C ENSP00000510034.1:n.*74-19G>C
ENST00000686600.1:c.58-19G>C ENSP00000509268.1:n.58-19G>C
ENST00000686799.1:n.155-19G>C
ENST00000687427.1:c.58-19G>C ENSP00000509426.1:n.58-19G>C
ENST00000687817.1:c.58-19G>C ENSP00000508926.1:n.58-19G>C
ENST00000687972.1:c.58-19G>C ENSP00000509208.1:n.58-19G>C
ENST00000689401.1:c.*74-19G>C ENSP00000510251.1:n.*74-19G>C
ENST00000689423.1:c.*74-19G>C ENSP00000508519.1:n.*74-19G>C
ENST00000690139.1:c.58-19G>C ENSP00000510483.1:n.58-19G>C
ENST00000692363.1:c.58-19G>C ENSP00000509481.1:n.58-19G>C
ENST00000692458.1:n.81-19G>C
ENST00000693147.1:c.*74-19G>C ENSP00000510358.1:n.*74-19G>C
ENST00000262554.7:c.58-19G>C MANE Select ENSP00000262554.2:n.58-19G>C
ENST00000644140.1:c.58-19G>C ENSP00000493933.1:n.58-19G>C
ENST00000646534.1:c.58-19G>C ENSP00000495388.1:n.58-19G>C
ENST00000262554.6:c.58-19G>C ENSP00000262554.2:n.58-19G>C
ENST00000337841.4:c.58-19G>C ENSP00000337635.4:n.58-19G>C
ENST00000461132.1:n.26-19G>C
ENST00000482632.5:n.72-19G>C
ENST00000488921.5:n.215-19G>C
NM_001281303.1:c.58-19G>C NP_001268232.1:n.58-19G>C
NM_006415.3:c.58-19G>C NP_006406.1:n.58-19G>C
NM_178324.2:c.58-19G>C NP_847894.1:n.58-19G>C
XM_011518138.1:c.58-19G>C XP_011516440.1:n.58-19G>C
XM_011518139.1:c.-408-19G>C XP_011516441.1:n.-408-19G>C
XM_011518138.2:c.58-19G>C XP_011516440.1:n.58-19G>C
XM_011518139.3:c.-408-19G>C XP_011516441.1:n.-408-19G>C
XM_017014200.2:c.-442-19G>C XP_016869689.1:n.-442-19G>C
XM_017014201.2:c.-442-19G>C XP_016869690.1:n.-442-19G>C
XR_002956744.1:n.75-19G>C
NM_006415.4:c.58-19G>C MANE Select NP_006406.1:n.58-19G>C
NM_001281303.2:c.58-19G>C NP_001268232.1:n.58-19G>C
NM_001368272.1:c.-442-19G>C NP_001355201.1:n.-442-19G>C
NM_001368273.1:c.-408-19G>C NP_001355202.1:n.-408-19G>C
NM_178324.3:c.58-19G>C NP_847894.1:n.58-19G>C