Canonical Allele Identifier: CA5121537
Gene: SPTLC1 HGNC NCBI

Linked Data

ClinVar Variation Id: 1624987
ClinVar RCV Id: RCV002106508
dbSNP Id: rs780781553
gnomAD v2: 9-94830354-G-A
gnomAD v4: 9-92068072-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000009.12:g.92068072G>A , CM000671.2:g.92068072G>A GRCh38
NC_000009.11:g.94830354G>A , CM000671.1:g.94830354G>A GRCh37
NC_000009.10:g.93870175G>A NCBI36
NG_007950.1:g.52337C>T , LRG_272:g.52337C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000482632.6:n.864C>T
ENST00000686600.1:c.454C>T ENSP00000509268.1:p.Leu152=
ENST00000686799.1:n.551C>T
ENST00000687427.1:c.454C>T ENSP00000509426.1:p.Leu152=
ENST00000687817.1:c.*257C>T ENSP00000508926.1:n.*257C>T
ENST00000687972.1:c.514C>T ENSP00000509208.1:p.Leu172=
ENST00000689261.1:n.361C>T
ENST00000689401.1:c.*704C>T ENSP00000510251.1:n.*704C>T
ENST00000689423.1:c.*704C>T ENSP00000508519.1:n.*704C>T
ENST00000690095.1:n.782C>T
ENST00000690139.1:c.*155C>T ENSP00000510483.1:n.*155C>T
ENST00000692458.1:n.477C>T
ENST00000693147.1:c.*470C>T ENSP00000510358.1:n.*470C>T
ENST00000262554.7:c.454C>T MANE Select ENSP00000262554.2:p.Leu152=
ENST00000642671.1:c.499C>T ENSP00000495764.1:n.499C>T
ENST00000643599.1:c.326C>T ENSP00000494770.1:n.326C>T
ENST00000644140.1:c.*195C>T ENSP00000493933.1:n.*195C>T
ENST00000646481.1:c.326C>T ENSP00000496627.1:n.326C>T
ENST00000646534.1:c.*257C>T ENSP00000495388.1:n.*257C>T
ENST00000262554.6:c.454C>T ENSP00000262554.2:p.Leu152=
ENST00000482632.5:n.601C>T
NM_001281303.1:c.454C>T NP_001268232.1:p.Leu152=
NM_006415.3:c.454C>T NP_006406.1:p.Leu152=
XM_011518138.1:c.454C>T XP_011516440.1:p.Leu152=
XM_011518139.1:c.-12C>T XP_011516441.1:n.-12C>T
XM_011518138.2:c.454C>T XP_011516440.1:p.Leu152=
XM_011518139.3:c.-12C>T XP_011516441.1:n.-12C>T
XM_017014200.2:c.88C>T XP_016869689.1:p.Leu30=
XM_017014201.2:c.88C>T XP_016869690.1:p.Leu30=
XM_024447378.1:c.-12C>T XP_024303146.1:n.-12C>T
XM_024447379.1:c.-12C>T XP_024303147.1:n.-12C>T
XR_002956744.1:n.604C>T
NM_006415.4:c.454C>T MANE Select NP_006406.1:p.Leu152=
NM_001281303.2:c.454C>T NP_001268232.1:p.Leu152=
NM_001368272.1:c.88C>T NP_001355201.1:p.Leu30=
NM_001368273.1:c.-12C>T NP_001355202.1:n.-12C>T