Canonical Allele Identifier: CA5121282
Gene: SPTLC1 HGNC NCBI

Linked Data

ClinVar Variation Id: 2739028
ClinVar RCV Id: RCV003506652
dbSNP Id: rs568357208
gnomAD v2: 9-94800575-C-T
gnomAD v3: 9-92038293-C-T
gnomAD v4: 9-92038293-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000009.12:g.92038293C>T , CM000671.2:g.92038293C>T GRCh38
NC_000009.11:g.94800575C>T , CM000671.1:g.94800575C>T GRCh37
NC_000009.10:g.93840396C>T NCBI36
NG_007950.1:g.82116G>A , LRG_272:g.82116G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000482632.6:n.1619G>A
ENST00000686600.1:c.1209G>A ENSP00000509268.1:p.Gly403=
ENST00000686799.1:n.1306G>A
ENST00000687427.1:c.1209G>A ENSP00000509426.1:p.Gly403=
ENST00000687817.1:c.*1356G>A ENSP00000508926.1:n.*1356G>A
ENST00000687972.1:c.1269G>A ENSP00000509208.1:p.Gly423=
ENST00000689261.1:n.1116G>A
ENST00000689401.1:c.*1459G>A ENSP00000510251.1:n.*1459G>A
ENST00000689423.1:c.*1459G>A ENSP00000508519.1:n.*1459G>A
ENST00000690095.1:n.1597G>A
ENST00000690139.1:c.*910G>A ENSP00000510483.1:n.*910G>A
ENST00000692458.1:n.1576G>A
ENST00000693147.1:c.*1225G>A ENSP00000510358.1:n.*1225G>A
ENST00000262554.7:c.1209G>A MANE Select ENSP00000262554.2:p.Gly403=
ENST00000642671.1:c.1510G>A ENSP00000495764.1:n.1510G>A
ENST00000643599.1:c.1277G>A ENSP00000494770.1:n.1277G>A
ENST00000644140.1:c.*950G>A ENSP00000493933.1:n.*950G>A
ENST00000646481.1:c.1141G>A ENSP00000496627.1:n.1141G>A
ENST00000646534.1:c.*1012G>A ENSP00000495388.1:n.*1012G>A
ENST00000262554.6:c.1209G>A ENSP00000262554.2:p.Gly403=
ENST00000469778.1:n.166G>A
NM_001281303.1:c.1209G>A NP_001268232.1:p.Gly403=
NM_006415.3:c.1209G>A NP_006406.1:p.Gly403=
XM_011518139.1:c.744G>A XP_011516441.1:p.Gly248=
XM_011518139.3:c.744G>A XP_011516441.1:p.Gly248=
XM_017014200.2:c.843G>A XP_016869689.1:p.Gly281=
XM_017014201.2:c.843G>A XP_016869690.1:p.Gly281=
XM_024447378.1:c.744G>A XP_024303146.1:p.Gly248=
XM_024447379.1:c.744G>A XP_024303147.1:p.Gly248=
XR_002956744.1:n.1359G>A
NM_006415.4:c.1209G>A MANE Select NP_006406.1:p.Gly403=
NM_001281303.2:c.1209G>A NP_001268232.1:p.Gly403=
NM_001368272.1:c.843G>A NP_001355201.1:p.Gly281=
NM_001368273.1:c.744G>A NP_001355202.1:p.Gly248=