Canonical Allele Identifier: CA46752873

Gene: LHCGR STON1-GTF2A1L GTF2A1L

Linked Data

• dbSNP Id: rs143466081
• gnomAD v2: 2-48915311-A-G
• gnomAD v4: 2-48688172-A-G
• MyVariant Identifiers: chr2:g.48915311A>G (hg19) ; chr2:g.48688172A>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.48688172A>G , CM000664.2:g.48688172A>G	GRCh38
NC_000002.11:g.48915311A>G , CM000664.1:g.48915311A>G	GRCh37
NC_000002.10:g.48768815A>G	NCBI36
NG_008193.1:g.72570T>C
NG_033050.1:g.163248A>G
NG_008193.2:g.72570T>C
NG_033050.2:g.163248A>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000294954.12:c.1625T>C (LHCGR) MANE Select	ENSP00000294954.6:p.Ile542Thr
ENST00000294954.11:c.1625T>C (LHCGR)	ENSP00000294954.6:p.Ile542Thr
ENST00000401907.5:c.948-33T>C (LHCGR)	ENSP00000385406.1:n.948-33T>C
ENST00000402114.6:c.3441+16492A>G (STON1-GTF2A1L)	ENSP00000385701.1:n.3441+16492A>G
ENST00000403273.5:c.*369T>C (LHCGR)	ENSP00000385847.1:n.*369T>C
ENST00000405626.5:c.1544T>C (LHCGR)	ENSP00000386033.1:p.Ile515Thr
ENST00000508440.1:c.276+16492A>G (GTF2A1L)	ENSP00000421474.1:n.276+16492A>G
ENST00000602369.3:c.*220+6052T>C	ENSP00000473498.1:n.*220+6052T>C
NM_000233.3:c.1625T>C (LHCGR)	NP_000224.2:p.Ile542Thr
NM_001198593.1:c.3441+16492A>G (STON1-GTF2A1L)	NP_001185522.1:n.3441+16492A>G
XM_005264309.2:c.668T>C (LHCGR)	XP_005264366.1:p.Ile223Thr
XM_006712015.2:c.695T>C (LHCGR)	XP_006712078.1:p.Ile232Thr
XM_011532828.1:c.1550T>C (LHCGR)	XP_011531130.1:p.Ile517Thr
XM_011532829.1:c.1364T>C (LHCGR)	XP_011531131.1:p.Ile455Thr
XM_011532830.1:c.1283T>C (LHCGR)	XP_011531132.1:p.Ile428Thr
XM_011532831.1:c.989T>C (LHCGR)	XP_011531133.1:p.Ile330Thr
XM_011532832.1:c.695T>C (LHCGR)	XP_011531134.1:p.Ile232Thr
XM_011532833.1:c.695T>C (LHCGR)	XP_011531135.1:p.Ile232Thr
XM_011532834.1:c.668T>C (LHCGR)	XP_011531136.1:p.Ile223Thr
XM_005264309.3:c.668T>C (LHCGR)	XP_005264366.1:p.Ile223Thr
XM_006712015.3:c.695T>C (LHCGR)	XP_006712078.1:p.Ile232Thr
XM_011532834.2:c.668T>C (LHCGR)	XP_011531136.1:p.Ile223Thr
XM_017004089.1:c.1370T>C (LHCGR)	XP_016859578.1:p.Ile457Thr
XM_017004090.1:c.989T>C (LHCGR)	XP_016859579.1:p.Ile330Thr
NM_000233.4:c.1625T>C (LHCGR) MANE Select	NP_000224.2:p.Ile542Thr
NM_001198593.2:c.3441+16492A>G (STON1-GTF2A1L)	NP_001185522.1:n.3441+16492A>G