Canonical Allele Identifier: CA453745752
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 748716
ClinVar RCV Id: RCV001425667
dbSNP Id: rs1583314396
MyVariant Identifiers: chr7:g.6026527A>G (hg19)

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5986896A>G , CM000669.2:g.5986896A>G GRCh38
NC_000007.13:g.6026527A>G , CM000669.1:g.6026527A>G GRCh37
NC_000007.12:g.5993053A>G NCBI36
NG_008466.1:g.27211T>C , LRG_161:g.27211T>C

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1265T>C ENSP00000514615.2:n.*1265T>C
ENST00000699840.2:c.1866T>C ENSP00000514638.2:p.Ser622=
ENST00000699930.2:c.1761T>C ENSP00000514695.2:p.Ser587=
ENST00000406569.8:c.1678+191T>C ENSP00000514464.1:n.1678+191T>C
ENST00000644110.2:c.*1463T>C ENSP00000496392.2:n.*1463T>C
ENST00000699752.1:c.1713T>C ENSP00000514561.1:p.Ser571=
ENST00000699753.1:c.*1290T>C ENSP00000514562.1:n.*1290T>C
ENST00000699754.1:c.1671T>C ENSP00000514563.1:p.Ser557=
ENST00000699755.1:c.*1268T>C ENSP00000514564.1:n.*1268T>C
ENST00000699756.1:c.*1456T>C ENSP00000514565.1:n.*1456T>C
ENST00000699757.1:c.*1126T>C ENSP00000514566.1:n.*1126T>C
ENST00000699758.1:c.*1126T>C ENSP00000514567.1:n.*1126T>C
ENST00000699759.1:n.2723T>C
ENST00000699760.1:c.1551T>C ENSP00000514568.1:p.Ser517=
ENST00000699761.1:c.1464T>C ENSP00000514569.1:p.Ser488=
ENST00000699762.1:c.1296T>C ENSP00000514570.1:p.Ser432=
ENST00000699763.1:c.*959T>C ENSP00000514571.1:n.*959T>C
ENST00000699764.1:c.*187T>C ENSP00000514572.1:n.*187T>C
ENST00000699765.1:c.*965T>C ENSP00000514573.1:n.*965T>C
ENST00000699766.1:c.1869T>C ENSP00000514574.1:p.Ser623=
ENST00000699767.1:c.1869T>C ENSP00000514575.1:p.Ser623=
ENST00000699768.1:c.1869T>C ENSP00000514576.1:p.Ser623=
ENST00000699811.1:c.1464T>C ENSP00000514614.1:p.Ser488=
ENST00000699813.1:n.1982T>C
ENST00000699814.1:c.1492T>C
ENST00000699815.1:c.*1400T>C ENSP00000514616.1:n.*1400T>C
ENST00000699816.1:c.*759T>C ENSP00000514617.1:n.*759T>C
ENST00000699817.1:c.*1463T>C ENSP00000514618.1:n.*1463T>C
ENST00000699818.1:c.1464T>C ENSP00000514619.1:p.Ser488=
ENST00000699819.1:c.*1026T>C ENSP00000514620.1:n.*1026T>C
ENST00000699820.1:c.1144+2904T>C ENSP00000514621.1:n.1144+2904T>C
ENST00000699821.1:c.1464T>C ENSP00000514622.1:p.Ser488=
ENST00000699822.1:c.*1321T>C ENSP00000514623.1:n.*1321T>C
ENST00000699823.1:c.1464T>C ENSP00000514624.1:p.Ser488=
ENST00000699824.1:c.*1372T>C ENSP00000514625.1:n.*1372T>C
ENST00000699825.1:c.1308T>C ENSP00000514626.1:p.Ser436=
ENST00000699826.1:c.*1268T>C ENSP00000514627.1:n.*1268T>C
ENST00000699827.1:c.1701T>C ENSP00000514628.1:p.Ser567=
ENST00000699828.1:c.*959T>C ENSP00000514629.1:n.*959T>C
ENST00000699833.1:n.3641T>C
ENST00000699837.1:c.1464T>C ENSP00000514635.1:p.Ser488=
ENST00000699838.1:c.*1769T>C ENSP00000514636.1:n.*1769T>C
ENST00000699839.1:c.2055T>C ENSP00000514637.1:p.Ser685=
ENST00000699916.1:c.*1126T>C ENSP00000514684.1:n.*1126T>C
ENST00000699917.1:c.*1318T>C ENSP00000514685.1:n.*1318T>C
ENST00000699918.1:c.*1370T>C ENSP00000514686.1:n.*1370T>C
ENST00000699919.1:c.*1456T>C ENSP00000514687.1:n.*1456T>C
ENST00000699920.1:c.*1505T>C ENSP00000514688.1:n.*1505T>C
ENST00000699928.1:c.989-3905T>C ENSP00000514693.1:n.989-3905T>C
ENST00000699951.1:c.*965T>C ENSP00000514706.1:n.*965T>C
ENST00000699952.1:c.803+10430T>C ENSP00000514707.1:n.803+10430T>C
ENST00000265849.12:c.1869T>C MANE Select ENSP00000265849.7:p.Ser623=
ENST00000642292.1:c.1464T>C ENSP00000495524.1:p.Ser488=
ENST00000642456.1:c.1464T>C ENSP00000493814.1:p.Ser488=
ENST00000643595.1:c.*1268T>C ENSP00000494497.1:n.*1268T>C
ENST00000644110.1:c.1551T>C ENSP00000496392.1:p.Ser517=
ENST00000265849.11:c.1869T>C ENSP00000265849.7:p.Ser623=
ENST00000382321.5:c.804-3905T>C ENSP00000371758.4:n.804-3905T>C
ENST00000406569.7:n.1678+191T>C
ENST00000441476.6:c.1551T>C ENSP00000392843.2:p.Ser517=
ENST00000469652.1:n.63-3991T>C
NM_000535.5:c.1869T>C , LRG_161t1:c.1869T>C NP_000526.1:p.Ser623=
NR_003085.2:n.1951T>C
XM_006715742.2:c.1863T>C XP_006715805.1:p.Ser621=
XM_006715744.2:c.936T>C XP_006715807.1:p.Ser312=
XM_011515427.1:c.1914T>C XP_011513729.1:p.Ser638=
XM_011515428.1:c.1758T>C XP_011513730.1:p.Ser586=
XM_011515429.1:c.1551T>C XP_011513731.1:p.Ser517=
XM_011515430.1:c.1551T>C XP_011513732.1:p.Ser517=
NM_000535.6:c.1869T>C NP_000526.2:p.Ser623=
NM_001322003.1:c.1464T>C NP_001308932.1:p.Ser488=
NM_001322004.1:c.1464T>C NP_001308933.1:p.Ser488=
NM_001322005.1:c.1464T>C NP_001308934.1:p.Ser488=
NM_001322006.1:c.1713T>C NP_001308935.1:p.Ser571=
NM_001322007.1:c.1551T>C NP_001308936.1:p.Ser517=
NM_001322008.1:c.1551T>C NP_001308937.1:p.Ser517=
NM_001322009.1:c.1464T>C NP_001308938.1:p.Ser488=
NM_001322010.1:c.1308T>C NP_001308939.1:p.Ser436=
NM_001322011.1:c.936T>C NP_001308940.1:p.Ser312=
NM_001322012.1:c.936T>C NP_001308941.1:p.Ser312=
NM_001322013.1:c.1296T>C NP_001308942.1:p.Ser432=
NM_001322014.1:c.1869T>C NP_001308943.1:p.Ser623=
NM_001322015.1:c.1560T>C NP_001308944.1:p.Ser520=
NR_136154.1:n.1956T>C
XM_006715744.4:c.936T>C XP_006715807.1:p.Ser312=
XM_017012342.2:c.936T>C XP_016867831.1:p.Ser312=
XM_024446800.1:c.1308T>C XP_024302568.1:p.Ser436=
NM_000535.7:c.1869T>C MANE Select NP_000526.2:p.Ser623=
NM_001322003.2:c.1464T>C NP_001308932.1:p.Ser488=
NM_001322004.2:c.1464T>C NP_001308933.1:p.Ser488=
NM_001322005.2:c.1464T>C NP_001308934.1:p.Ser488=
NM_001322006.2:c.1713T>C NP_001308935.1:p.Ser571=
NM_001322008.2:c.1551T>C NP_001308937.1:p.Ser517=
NM_001322009.2:c.1464T>C NP_001308938.1:p.Ser488=
NM_001322010.2:c.1308T>C NP_001308939.1:p.Ser436=
NM_001322011.2:c.936T>C NP_001308940.1:p.Ser312=
NM_001322012.2:c.936T>C NP_001308941.1:p.Ser312=
NM_001322013.2:c.1296T>C NP_001308942.1:p.Ser432=
NM_001322014.2:c.1869T>C NP_001308943.1:p.Ser623=
NM_001322015.2:c.1560T>C NP_001308944.1:p.Ser520=
NM_001322007.2:c.1551T>C NP_001308936.1:p.Ser517=