Canonical Allele Identifier: CA453643015
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 1786605
ClinVar RCV Id: RCV002430570
dbSNP Id: rs2128702748
gnomAD v4: 7-5982856-C-T
MyVariant Identifiers: chr7:g.6022487C>T (hg19)

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5982856C>T , CM000669.2:g.5982856C>T GRCh38
NC_000007.13:g.6022487C>T , CM000669.1:g.6022487C>T GRCh37
NC_000007.12:g.5989013C>T NCBI36
NG_008466.1:g.31251G>A , LRG_161:g.31251G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1538G>A ENSP00000514615.2:n.*1538G>A
ENST00000699840.2:c.2139G>A ENSP00000514638.2:p.Gln713=
ENST00000699930.2:c.2034G>A ENSP00000514695.2:p.Gln678=
ENST00000406569.8:c.1678+4231G>A ENSP00000514464.1:n.1678+4231G>A
ENST00000644110.2:c.*1736G>A ENSP00000496392.2:n.*1736G>A
ENST00000699752.1:c.1986G>A ENSP00000514561.1:p.Gln662=
ENST00000699753.1:c.*1563G>A ENSP00000514562.1:n.*1563G>A
ENST00000699754.1:c.1944G>A ENSP00000514563.1:p.Gln648=
ENST00000699755.1:c.*1541G>A ENSP00000514564.1:n.*1541G>A
ENST00000699756.1:c.*1729G>A ENSP00000514565.1:n.*1729G>A
ENST00000699757.1:c.*1399G>A ENSP00000514566.1:n.*1399G>A
ENST00000699758.1:c.*1399G>A ENSP00000514567.1:n.*1399G>A
ENST00000699759.1:n.2996G>A
ENST00000699760.1:c.1824G>A ENSP00000514568.1:p.Gln608=
ENST00000699761.1:c.1737G>A ENSP00000514569.1:p.Gln579=
ENST00000699762.1:c.1569G>A ENSP00000514570.1:p.Gln523=
ENST00000699763.1:c.*1232G>A ENSP00000514571.1:n.*1232G>A
ENST00000699764.1:c.*460G>A ENSP00000514572.1:n.*460G>A
ENST00000699765.1:c.*1238G>A ENSP00000514573.1:n.*1238G>A
ENST00000699766.1:c.2142G>A ENSP00000514574.1:p.Gln714=
ENST00000699767.1:c.2142G>A ENSP00000514575.1:p.Gln714=
ENST00000699768.1:c.2142G>A ENSP00000514576.1:p.Gln714=
ENST00000699811.1:c.1737G>A ENSP00000514614.1:p.Gln579=
ENST00000699813.1:n.2255G>A
ENST00000699814.1:c.1765G>A
ENST00000699815.1:c.*1673G>A ENSP00000514616.1:n.*1673G>A
ENST00000699816.1:c.*1032G>A ENSP00000514617.1:n.*1032G>A
ENST00000699817.1:c.*1736G>A ENSP00000514618.1:n.*1736G>A
ENST00000699818.1:c.1737G>A ENSP00000514619.1:p.Gln579=
ENST00000699819.1:c.*1299G>A ENSP00000514620.1:n.*1299G>A
ENST00000699820.1:c.*80G>A ENSP00000514621.1:n.*80G>A
ENST00000699821.1:c.1737G>A ENSP00000514622.1:p.Gln579=
ENST00000699822.1:c.*1594G>A ENSP00000514623.1:n.*1594G>A
ENST00000699823.1:c.1737G>A ENSP00000514624.1:p.Gln579=
ENST00000699824.1:c.*1645G>A ENSP00000514625.1:n.*1645G>A
ENST00000699825.1:c.1581G>A ENSP00000514626.1:p.Gln527=
ENST00000699826.1:c.*1541G>A ENSP00000514627.1:n.*1541G>A
ENST00000699827.1:c.1974G>A ENSP00000514628.1:p.Gln658=
ENST00000699828.1:c.*1232G>A ENSP00000514629.1:n.*1232G>A
ENST00000699833.1:n.3914G>A
ENST00000699837.1:c.1737G>A ENSP00000514635.1:p.Gln579=
ENST00000699838.1:c.*2042G>A ENSP00000514636.1:n.*2042G>A
ENST00000699839.1:c.2328G>A ENSP00000514637.1:p.Gln776=
ENST00000699916.1:c.*1399G>A ENSP00000514684.1:n.*1399G>A
ENST00000699917.1:c.*1591G>A ENSP00000514685.1:n.*1591G>A
ENST00000699918.1:c.*1643G>A ENSP00000514686.1:n.*1643G>A
ENST00000699919.1:c.*1729G>A ENSP00000514687.1:n.*1729G>A
ENST00000699920.1:c.*1778G>A ENSP00000514688.1:n.*1778G>A
ENST00000699928.1:c.*80G>A ENSP00000514693.1:n.*80G>A
ENST00000699951.1:c.*1238G>A ENSP00000514706.1:n.*1238G>A
ENST00000699952.1:c.804-9314G>A ENSP00000514707.1:n.804-9314G>A
ENST00000265849.12:c.2142G>A MANE Select ENSP00000265849.7:p.Gln714=
ENST00000642292.1:c.1737G>A ENSP00000495524.1:p.Gln579=
ENST00000642456.1:c.1737G>A ENSP00000493814.1:p.Gln579=
ENST00000643595.1:c.*1541G>A ENSP00000494497.1:n.*1541G>A
ENST00000644110.1:c.1824G>A ENSP00000496392.1:p.Gln608=
ENST00000265849.11:c.2142G>A ENSP00000265849.7:p.Gln714=
ENST00000382321.5:c.939G>A ENSP00000371758.4:p.Gln313=
ENST00000406569.7:n.1678+4231G>A
ENST00000441476.6:c.1824G>A ENSP00000392843.2:p.Gln608=
NM_000535.5:c.2142G>A , LRG_161t1:c.2142G>A NP_000526.1:p.Gln714=
NR_003085.2:n.2224G>A
XM_006715742.2:c.2136G>A XP_006715805.1:p.Gln712=
XM_006715744.2:c.1209G>A XP_006715807.1:p.Gln403=
XM_011515427.1:c.2187G>A XP_011513729.1:p.Gln729=
XM_011515428.1:c.2031G>A XP_011513730.1:p.Gln677=
XM_011515429.1:c.1824G>A XP_011513731.1:p.Gln608=
XM_011515430.1:c.1824G>A XP_011513732.1:p.Gln608=
NM_000535.6:c.2142G>A NP_000526.2:p.Gln714=
NM_001322003.1:c.1737G>A NP_001308932.1:p.Gln579=
NM_001322004.1:c.1737G>A NP_001308933.1:p.Gln579=
NM_001322005.1:c.1737G>A NP_001308934.1:p.Gln579=
NM_001322006.1:c.1986G>A NP_001308935.1:p.Gln662=
NM_001322007.1:c.1824G>A NP_001308936.1:p.Gln608=
NM_001322008.1:c.1824G>A NP_001308937.1:p.Gln608=
NM_001322009.1:c.1737G>A NP_001308938.1:p.Gln579=
NM_001322010.1:c.1581G>A NP_001308939.1:p.Gln527=
NM_001322011.1:c.1209G>A NP_001308940.1:p.Gln403=
NM_001322012.1:c.1209G>A NP_001308941.1:p.Gln403=
NM_001322013.1:c.1569G>A NP_001308942.1:p.Gln523=
NM_001322014.1:c.2142G>A NP_001308943.1:p.Gln714=
NM_001322015.1:c.1833G>A NP_001308944.1:p.Gln611=
NR_136154.1:n.2229G>A
XM_006715744.4:c.1209G>A XP_006715807.1:p.Gln403=
XM_017012342.2:c.1209G>A XP_016867831.1:p.Gln403=
XM_024446800.1:c.1581G>A XP_024302568.1:p.Gln527=
NM_000535.7:c.2142G>A MANE Select NP_000526.2:p.Gln714=
NM_001322003.2:c.1737G>A NP_001308932.1:p.Gln579=
NM_001322004.2:c.1737G>A NP_001308933.1:p.Gln579=
NM_001322005.2:c.1737G>A NP_001308934.1:p.Gln579=
NM_001322006.2:c.1986G>A NP_001308935.1:p.Gln662=
NM_001322008.2:c.1824G>A NP_001308937.1:p.Gln608=
NM_001322009.2:c.1737G>A NP_001308938.1:p.Gln579=
NM_001322010.2:c.1581G>A NP_001308939.1:p.Gln527=
NM_001322011.2:c.1209G>A NP_001308940.1:p.Gln403=
NM_001322012.2:c.1209G>A NP_001308941.1:p.Gln403=
NM_001322013.2:c.1569G>A NP_001308942.1:p.Gln523=
NM_001322014.2:c.2142G>A NP_001308943.1:p.Gln714=
NM_001322015.2:c.1833G>A NP_001308944.1:p.Gln611=
NM_001322007.2:c.1824G>A NP_001308936.1:p.Gln608=