Canonical Allele Identifier: CA453642358

Gene: PMS2

Linked Data

• ClinVar Variation Id: 766730
• ClinVar RCV Id: RCV001478703 ; RCV002454169
• dbSNP Id: rs1583280086
• gnomAD v4: 7-5977639-G-A
• MyVariant Identifiers: chr7:g.6017270G>A (hg19)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5977639G>A , CM000669.2:g.5977639G>A	GRCh38
NC_000007.13:g.6017270G>A , CM000669.1:g.6017270G>A	GRCh37
NC_000007.12:g.5983796G>A	NCBI36
NG_008466.1:g.36468C>T , LRG_161:g.36468C>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000699814.2:c.*1790C>T	ENSP00000514615.2:n.*1790C>T
ENST00000699840.2:c.2391C>T	ENSP00000514638.2:p.Cys797=
ENST00000699930.2:c.2286C>T	ENSP00000514695.2:p.Cys762=
ENST00000406569.8:c.1754C>T	ENSP00000514464.1:n.1754C>T
ENST00000644110.2:c.*1988C>T	ENSP00000496392.2:n.*1988C>T
ENST00000699752.1:c.2238C>T	ENSP00000514561.1:p.Cys746=
ENST00000699753.1:c.*1815C>T	ENSP00000514562.1:n.*1815C>T
ENST00000699754.1:c.2196C>T	ENSP00000514563.1:p.Cys732=
ENST00000699755.1:c.*1793C>T	ENSP00000514564.1:n.*1793C>T
ENST00000699756.1:c.*1981C>T	ENSP00000514565.1:n.*1981C>T
ENST00000699757.1:c.*1651C>T	ENSP00000514566.1:n.*1651C>T
ENST00000699758.1:c.*1651C>T	ENSP00000514567.1:n.*1651C>T
ENST00000699759.1:n.3248C>T
ENST00000699760.1:c.2076C>T	ENSP00000514568.1:p.Cys692=
ENST00000699761.1:c.1989C>T	ENSP00000514569.1:p.Cys663=
ENST00000699762.1:c.1821C>T	ENSP00000514570.1:p.Cys607=
ENST00000699763.1:c.*1484C>T	ENSP00000514571.1:n.*1484C>T
ENST00000699764.1:c.*712C>T	ENSP00000514572.1:n.*712C>T
ENST00000699765.1:c.*1389C>T	ENSP00000514573.1:n.*1389C>T
ENST00000699766.1:c.2427C>T	ENSP00000514574.1:p.Cys809=
ENST00000699767.1:c.*35C>T	ENSP00000514575.1:n.*35C>T
ENST00000699768.1:c.2250C>T	ENSP00000514576.1:p.Cys750=
ENST00000699811.1:c.1989C>T	ENSP00000514614.1:p.Cys663=
ENST00000699813.1:n.2507C>T
ENST00000699814.1:c.2017C>T
ENST00000699815.1:c.*1925C>T	ENSP00000514616.1:n.*1925C>T
ENST00000699816.1:c.*1284C>T	ENSP00000514617.1:n.*1284C>T
ENST00000699817.1:c.*1988C>T	ENSP00000514618.1:n.*1988C>T
ENST00000699818.1:c.1989C>T	ENSP00000514619.1:p.Cys663=
ENST00000699819.1:c.*1551C>T	ENSP00000514620.1:n.*1551C>T
ENST00000699820.1:c.*332C>T	ENSP00000514621.1:n.*332C>T
ENST00000699821.1:c.2022C>T	ENSP00000514622.1:p.Cys674=
ENST00000699822.1:c.*1846C>T	ENSP00000514623.1:n.*1846C>T
ENST00000699823.1:c.1989C>T	ENSP00000514624.1:p.Cys663=
ENST00000699824.1:c.*1897C>T	ENSP00000514625.1:n.*1897C>T
ENST00000699825.1:c.1833C>T	ENSP00000514626.1:p.Cys611=
ENST00000699826.1:c.*1793C>T	ENSP00000514627.1:n.*1793C>T
ENST00000699827.1:c.2226C>T	ENSP00000514628.1:p.Cys742=
ENST00000699828.1:c.*1484C>T	ENSP00000514629.1:n.*1484C>T
ENST00000699833.1:n.4166C>T
ENST00000699837.1:c.1989C>T	ENSP00000514635.1:p.Cys663=
ENST00000699838.1:c.*2294C>T	ENSP00000514636.1:n.*2294C>T
ENST00000699839.1:c.2580C>T	ENSP00000514637.1:p.Cys860=
ENST00000699916.1:c.*1651C>T	ENSP00000514684.1:n.*1651C>T
ENST00000699917.1:c.*1843C>T	ENSP00000514685.1:n.*1843C>T
ENST00000699918.1:c.*1895C>T	ENSP00000514686.1:n.*1895C>T
ENST00000699919.1:c.*1981C>T	ENSP00000514687.1:n.*1981C>T
ENST00000699920.1:c.*2030C>T	ENSP00000514688.1:n.*2030C>T
ENST00000699928.1:c.*332C>T	ENSP00000514693.1:n.*332C>T
ENST00000699951.1:c.*1447C>T	ENSP00000514706.1:n.*1447C>T
ENST00000699952.1:c.804-4097C>T	ENSP00000514707.1:n.804-4097C>T
ENST00000265849.12:c.2394C>T MANE Select	ENSP00000265849.7:p.Cys798=
ENST00000642292.1:c.1989C>T	ENSP00000495524.1:p.Cys663=
ENST00000642456.1:c.1989C>T	ENSP00000493814.1:p.Cys663=
ENST00000643595.1:c.*1793C>T	ENSP00000494497.1:n.*1793C>T
ENST00000644110.1:c.2076C>T	ENSP00000496392.1:p.Cys692=
ENST00000265849.11:c.2394C>T	ENSP00000265849.7:p.Cys798=
ENST00000382321.5:c.1191C>T	ENSP00000371758.4:p.Cys397=
ENST00000441476.6:c.2076C>T	ENSP00000392843.2:p.Cys692=
NM_000535.5:c.2394C>T , LRG_161t1:c.2394C>T	NP_000526.1:p.Cys798=
NR_003085.2:n.2476C>T
XM_006715742.2:c.2388C>T	XP_006715805.1:p.Cys796=
XM_006715744.2:c.1461C>T	XP_006715807.1:p.Cys487=
XM_011515427.1:c.2439C>T	XP_011513729.1:p.Cys813=
XM_011515428.1:c.2283C>T	XP_011513730.1:p.Cys761=
XM_011515429.1:c.2076C>T	XP_011513731.1:p.Cys692=
XM_011515430.1:c.2076C>T	XP_011513732.1:p.Cys692=
NM_000535.6:c.2394C>T	NP_000526.2:p.Cys798=
NM_001322003.1:c.1989C>T	NP_001308932.1:p.Cys663=
NM_001322004.1:c.1989C>T	NP_001308933.1:p.Cys663=
NM_001322005.1:c.1989C>T	NP_001308934.1:p.Cys663=
NM_001322006.1:c.2238C>T	NP_001308935.1:p.Cys746=
NM_001322007.1:c.2076C>T	NP_001308936.1:p.Cys692=
NM_001322008.1:c.2076C>T	NP_001308937.1:p.Cys692=
NM_001322009.1:c.2022C>T	NP_001308938.1:p.Cys674=
NM_001322010.1:c.1833C>T	NP_001308939.1:p.Cys611=
NM_001322011.1:c.1461C>T	NP_001308940.1:p.Cys487=
NM_001322012.1:c.1461C>T	NP_001308941.1:p.Cys487=
NM_001322013.1:c.1821C>T	NP_001308942.1:p.Cys607=
NM_001322014.1:c.2427C>T	NP_001308943.1:p.Cys809=
NM_001322015.1:c.2085C>T	NP_001308944.1:p.Cys695=
NR_136154.1:n.2438C>T
XM_006715744.4:c.1461C>T	XP_006715807.1:p.Cys487=
XM_017012342.2:c.1461C>T	XP_016867831.1:p.Cys487=
XM_024446800.1:c.1833C>T	XP_024302568.1:p.Cys611=
NM_000535.7:c.2394C>T MANE Select	NP_000526.2:p.Cys798=
NM_001322003.2:c.1989C>T	NP_001308932.1:p.Cys663=
NM_001322004.2:c.1989C>T	NP_001308933.1:p.Cys663=
NM_001322005.2:c.1989C>T	NP_001308934.1:p.Cys663=
NM_001322006.2:c.2238C>T	NP_001308935.1:p.Cys746=
NM_001322008.2:c.2076C>T	NP_001308937.1:p.Cys692=
NM_001322009.2:c.2022C>T	NP_001308938.1:p.Cys674=
NM_001322010.2:c.1833C>T	NP_001308939.1:p.Cys611=
NM_001322011.2:c.1461C>T	NP_001308940.1:p.Cys487=
NM_001322012.2:c.1461C>T	NP_001308941.1:p.Cys487=
NM_001322013.2:c.1821C>T	NP_001308942.1:p.Cys607=
NM_001322014.2:c.2427C>T	NP_001308943.1:p.Cys809=
NM_001322015.2:c.2085C>T	NP_001308944.1:p.Cys695=
NM_001322007.2:c.2076C>T	NP_001308936.1:p.Cys692=