Canonical Allele Identifier: CA450103729
Gene: SYNGAP1 HGNC NCBI
SYNGAP1-AS1 HGNC NCBI

Linked Data

ClinVar Variation Id: 2790392
ClinVar RCV Id: RCV003616075
MyVariant Identifiers: chr6:g.33410900C>T (hg19)

Genomic Alleles

HGVS Genome Assembly
NC_000006.12:g.33443123C>T , CM000668.2:g.33443123C>T GRCh38
NC_000006.11:g.33410900C>T , CM000668.1:g.33410900C>T GRCh37
NC_000006.10:g.33518878C>T NCBI36
NG_016137.1:g.28054C>T
NG_016137.2:g.28054C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000682587.1:c.2313C>T (SYNGAP1) ENSP00000507403.1:p.Ser771=
ENST00000418600.7:c.2571C>T (SYNGAP1) ENSP00000403636.3:p.Ser857=
ENST00000449372.7:c.2529C>T (SYNGAP1) ENSP00000416519.4:p.Ser843=
ENST00000629380.3:c.2571C>T (SYNGAP1) ENSP00000486463.1:p.Ser857=
ENST00000644458.1:c.2571C>T (SYNGAP1) ENSP00000495541.1:p.Ser857=
ENST00000645250.1:c.2394C>T (SYNGAP1) ENSP00000494861.1:p.Ser798=
ENST00000646630.1:c.2571C>T (SYNGAP1) MANE Select ENSP00000496007.1:p.Ser857=
ENST00000293748.9:c.2526C>T (SYNGAP1) ENSP00000293748.6:p.Ser842=
ENST00000418600.6:c.2571C>T (SYNGAP1) ENSP00000403636.3:p.Ser857=
ENST00000428982.4:c.2394C>T (SYNGAP1) ENSP00000412475.2:p.Ser798=
ENST00000449372.6:c.2529C>T (SYNGAP1) ENSP00000416519.3:p.Ser843=
ENST00000628646.2:c.2571C>T (SYNGAP1) ENSP00000486431.1:p.Ser857=
ENST00000629380.2:c.2571C>T (SYNGAP1) ENSP00000486463.1:p.Ser857=
NM_006772.2:c.2571C>T (SYNGAP1) NP_006763.2:p.Ser857=
NM_001130066.1:c.2529C>T (SYNGAP1) NP_001123538.1:p.Ser843=
NM_001130066.2:c.2529C>T (SYNGAP1) NP_001123538.1:p.Ser843=
NM_006772.3:c.2571C>T (SYNGAP1) MANE Select NP_006763.2:p.Ser857=
NR_174954.1:n.329+3483G>A (SYNGAP1-AS1)