Canonical Allele Identifier: CA429906345

Gene: SCN9A SCN1A-AS1

Linked Data

• dbSNP Id: rs1330912720
• gnomAD v3: 2-166294716-G-C
• gnomAD v4: 2-166294716-G-C
• MyVariant Identifiers: chr2:g.167151226G>C (hg19) ; chr2:g.166294716G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.166294716G>C , CM000664.2:g.166294716G>C	GRCh38
NC_000002.11:g.167151226G>C , CM000664.1:g.167151226G>C	GRCh37
NC_000002.10:g.166859472G>C	NCBI36
NG_012798.1:g.86272C>G , LRG_369:g.86272C>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000303354.11:c.902-54C>G (SCN9A)	ENSP00000304748.7:n.902-54C>G
ENST00000409435.6:c.902-54C>G (SCN9A)	ENSP00000386330.2:n.902-54C>G
ENST00000452182.2:c.902-54C>G (SCN9A)	ENSP00000393141.2:n.902-54C>G
ENST00000454569.6:c.902-54C>G (SCN9A)	ENSP00000413212.2:n.902-54C>G
ENST00000642356.2:c.902-54C>G (SCN9A) MANE Select	ENSP00000495601.1:n.902-54C>G
ENST00000644316.1:c.902-54C>G (SCN9A)	ENSP00000493939.1:n.902-54C>G
ENST00000645907.1:c.902-54C>G (SCN9A)	ENSP00000495983.1:n.902-54C>G
ENST00000303354.10:c.902-54C>G (SCN9A)	ENSP00000304748.7:n.902-54C>G
ENST00000409435.5:c.902-54C>G (SCN9A)	ENSP00000386330.1:n.902-54C>G
ENST00000409672.5:c.902-54C>G (SCN9A)	ENSP00000386306.1:n.902-54C>G
ENST00000452182.1:c.497-54C>G (SCN9A)	ENSP00000393141.1:n.497-54C>G
ENST00000454569.5:c.497-54C>G (SCN9A)	ENSP00000413212.1:n.497-54C>G
NM_002977.3:c.902-54C>G , LRG_369t1:c.902-54C>G (SCN9A)	NP_002968.1:n.902-54C>G
NR_110260.1:n.1181G>C (SCN1A-AS1)
XM_005246757.1:c.902-54C>G (SCN9A)	XP_005246814.1:n.902-54C>G
XM_011511616.1:c.902-54C>G (SCN9A)	XP_011509918.1:n.902-54C>G
XM_011511617.1:c.902-54C>G (SCN9A)	XP_011509919.1:n.902-54C>G
XM_011511618.1:c.902-54C>G (SCN9A)	XP_011509920.1:n.902-54C>G
XM_011511619.1:c.902-54C>G (SCN9A)	XP_011509921.1:n.902-54C>G
NM_001365536.1:c.902-54C>G (SCN9A) MANE Select	NP_001352465.1:n.902-54C>G
XM_011511616.3:c.902-54C>G (SCN9A)	XP_011509918.1:n.902-54C>G
XM_011511617.2:c.902-54C>G (SCN9A)	XP_011509919.1:n.902-54C>G
XM_011511618.2:c.902-54C>G (SCN9A)	XP_011509920.1:n.902-54C>G
XM_011511619.2:c.902-54C>G (SCN9A)	XP_011509921.1:n.902-54C>G
XM_017004668.1:c.515-54C>G (SCN9A)	XP_016860157.1:n.515-54C>G
XM_017004669.1:c.158-54C>G (SCN9A)	XP_016860158.1:n.158-54C>G
XR_001738886.1:n.1216-54C>G (SCN9A)