Canonical Allele Identifier: CA417886246
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

ClinVar Variation Id: 2921433
ClinVar RCV Id: RCV003780015
MyVariant Identifiers: chr1:g.46658073C>G (hg19)

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46192401C>G , CM000663.2:g.46192401C>G GRCh38
NC_000001.10:g.46658073C>G , CM000663.1:g.46658073C>G GRCh37
NC_000001.9:g.46430660C>G NCBI36
NG_009205.2:g.32905G>C
NG_009205.3:g.32905G>C

Transcript Alleles

HGVS Amino-acid Change
ENST00000396420.8:c.1320G>C (POMGNT1) ENSP00000379698.4:p.Leu440=
ENST00000477114.2:n.1882G>C (POMGNT1)
ENST00000497439.6:n.1492G>C (POMGNT1)
ENST00000684817.1:n.1680G>C (POMGNT1)
ENST00000684898.1:n.1882G>C (POMGNT1)
ENST00000685230.1:c.*630G>C (POMGNT1) ENSP00000510305.1:n.*630G>C
ENST00000685275.1:n.1867G>C (POMGNT1)
ENST00000685444.1:c.1221G>C (POMGNT1) ENSP00000510762.1:p.Leu407=
ENST00000685704.1:n.1882G>C (POMGNT1)
ENST00000685775.1:n.2847G>C (POMGNT1)
ENST00000685833.1:n.2198G>C (POMGNT1)
ENST00000686252.1:n.2394G>C (POMGNT1)
ENST00000686379.1:c.*444G>C (POMGNT1) ENSP00000508913.1:n.*444G>C
ENST00000686724.1:n.1492G>C (POMGNT1)
ENST00000686737.1:c.1320G>C (POMGNT1) ENSP00000508736.1:p.Leu440=
ENST00000687112.1:n.2186G>C (POMGNT1)
ENST00000687149.1:c.1320G>C (POMGNT1) ENSP00000509745.1:p.Leu440=
ENST00000687197.1:c.*260G>C (POMGNT1) ENSP00000510749.1:n.*260G>C
ENST00000687235.1:n.1882G>C (POMGNT1)
ENST00000687613.1:n.2070G>C (POMGNT1)
ENST00000687683.1:c.1320G>C (POMGNT1) ENSP00000508522.1:p.Leu440=
ENST00000688032.1:n.1882G>C (POMGNT1)
ENST00000688596.1:n.1971G>C (POMGNT1)
ENST00000688608.1:c.1221G>C (POMGNT1) ENSP00000508890.1:p.Leu407=
ENST00000688919.1:n.2516G>C (POMGNT1)
ENST00000689031.1:n.1882G>C (POMGNT1)
ENST00000689717.1:n.1492G>C (POMGNT1)
ENST00000689756.1:c.*952G>C (POMGNT1) ENSP00000509023.1:n.*952G>C
ENST00000690377.1:n.1667G>C (POMGNT1)
ENST00000690678.1:c.1320G>C (POMGNT1) ENSP00000508703.1:p.Leu440=
ENST00000691209.1:c.*260G>C (POMGNT1) ENSP00000510112.1:n.*260G>C
ENST00000691243.1:c.1320G>C (POMGNT1) ENSP00000510654.1:p.Leu440=
ENST00000692169.1:n.1469G>C (POMGNT1)
ENST00000692202.1:n.1895G>C (POMGNT1)
ENST00000692322.1:c.*1172G>C (POMGNT1) ENSP00000509017.1:n.*1172G>C
ENST00000692369.1:c.1320G>C (POMGNT1) ENSP00000508453.1:p.Leu440=
ENST00000692599.1:n.1882G>C (POMGNT1)
ENST00000692635.1:c.*260G>C (POMGNT1) ENSP00000508425.1:n.*260G>C
ENST00000693168.1:n.1581G>C (POMGNT1)
ENST00000693218.1:c.1320G>C (POMGNT1) ENSP00000510577.1:p.Leu440=
ENST00000693223.1:n.2268G>C (POMGNT1)
ENST00000693365.1:n.3954G>C (POMGNT1)
ENST00000371984.8:c.1320G>C (POMGNT1) MANE Select ENSP00000361052.3:p.Leu440=
ENST00000371984.7:c.1320G>C (POMGNT1) ENSP00000361052.3:p.Leu440=
ENST00000371992.1:c.1320G>C (POMGNT1) ENSP00000361060.1:p.Leu440=
ENST00000396420.7:c.*989G>C (POMGNT1) ENSP00000379698.3:n.*989G>C
ENST00000485714.1:n.706G>C (POMGNT1)
NM_001243766.1:c.1320G>C (POMGNT1) NP_001230695.1:p.Leu440=
NM_001290129.1:c.1254G>C (POMGNT1) NP_001277058.1:p.Leu418=
NM_001290130.1:c.891G>C (POMGNT1) NP_001277059.1:p.Leu297=
NM_017739.3:c.1320G>C (POMGNT1) NP_060209.3:p.Leu440=
XM_005271010.1:c.1320G>C (POMGNT1) XP_005271067.1:p.Leu440=
XM_006710755.1:c.1320G>C (POMGNT1) XP_006710818.1:p.Leu440=
XM_006710756.1:c.1320G>C (POMGNT1) XP_006710819.1:p.Leu440=
XM_011540460.1:c.679-3801C>G (TSPAN1) XP_011538762.1:n.679-3801C>G
XM_011540461.1:c.634-3801C>G (TSPAN1) XP_011538763.1:n.634-3801C>G
XM_011541759.1:c.1254G>C (POMGNT1) XP_011540061.1:p.Leu418=
XM_011541760.1:c.1254G>C (POMGNT1) XP_011540062.1:p.Leu418=
XM_011541761.1:c.228G>C (POMGNT1) XP_011540063.1:p.Leu76=
XR_946706.1:n.1480G>C (POMGNT1)
XM_011540460.3:c.679-3801C>G (TSPAN1) XP_011538762.1:n.679-3801C>G
XM_011541760.3:c.1254G>C (POMGNT1) XP_011540062.1:p.Leu418=
XM_017001690.1:c.1320G>C (POMGNT1) XP_016857179.1:p.Leu440=
NM_001243766.2:c.1320G>C (POMGNT1) NP_001230695.2:p.Leu440=
NM_001290129.2:c.1254G>C (POMGNT1) NP_001277058.2:p.Leu418=
NM_001290130.2:c.891G>C (POMGNT1) NP_001277059.2:p.Leu297=
NM_017739.4:c.1320G>C (POMGNT1) MANE Select NP_060209.4:p.Leu440=