Canonical Allele Identifier: CA413241867

Gene: SMC1A

Linked Data

• MyVariant Identifiers: chrX:g.53407564T>A (hg19) ; chrX:g.53380643T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000023.11:g.53380643T>A , CM000685.2:g.53380643T>A	GRCh38
NC_000023.10:g.53407564T>A , CM000685.1:g.53407564T>A	GRCh37
NC_000023.9:g.53424289T>A	NCBI36
NG_006988.2:g.47028A>T , LRG_773:g.47028A>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000322213.9:c.3595A>T MANE Select	ENSP00000323421.3:p.Ser1199Cys
ENST00000674590.1:c.2827A>T	ENSP00000502626.1:p.Ser943Cys
ENST00000675504.1:c.3529A>T	ENSP00000502524.1:p.Ser1177Cys
ENST00000322213.8:c.3595A>T	ENSP00000323421.3:p.Ser1199Cys
ENST00000375340.10:c.3529A>T	ENSP00000364489.7:p.Ser1177Cys
ENST00000470241.2:c.815A>T
NM_001281463.1:c.3529A>T , LRG_773t1:c.3529A>T	NP_001268392.1:p.Ser1177Cys
NM_006306.3:c.3595A>T , LRG_773t2:c.3595A>T	NP_006297.2:p.Ser1199Cys
NM_006306.4:c.3595A>T MANE Select	NP_006297.2:p.Ser1199Cys