Canonical Allele Identifier: CA411023958

Gene: HPS4

Linked Data

• MyVariant Identifiers: chr22:g.26853885G>C (hg19) ; chr22:g.26457919G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000022.11:g.26457919G>C , CM000684.2:g.26457919G>C	GRCh38
NC_000022.10:g.26853885G>C , CM000684.1:g.26853885G>C	GRCh37
NC_000022.9:g.25183885G>C	NCBI36
NG_009763.2:g.30945C>G , LRG_590:g.30945C>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000422379.3:c.1949C>G	ENSP00000415081.3:p.Ala650Gly
ENST00000473782.2:c.1895C>G	ENSP00000514223.1:p.Ala632Gly
ENST00000483631.2:c.1100C>G	ENSP00000514228.1:p.Ala367Gly
ENST00000491142.2:c.1895C>G	ENSP00000514221.1:p.Ala632Gly
ENST00000699226.1:n.4821C>G
ENST00000699227.1:c.*1239C>G	ENSP00000514220.1:n.*1239C>G
ENST00000699228.1:n.2445C>G
ENST00000699229.1:n.1312C>G
ENST00000699230.1:n.2618C>G
ENST00000699231.1:n.4907C>G
ENST00000699232.1:n.3251C>G
ENST00000699233.1:n.1766C>G
ENST00000699234.1:c.*1239C>G	ENSP00000514222.1:n.*1239C>G
ENST00000699235.1:c.1100C>G	ENSP00000514224.1:p.Ala367Gly
ENST00000699236.1:c.*1084C>G	ENSP00000514225.1:n.*1084C>G
ENST00000699237.1:c.*1084C>G	ENSP00000514226.1:n.*1084C>G
ENST00000699238.1:c.*1438C>G	ENSP00000514227.1:n.*1438C>G
ENST00000699239.1:n.4649C>G
ENST00000699240.1:c.*1552C>G	ENSP00000514229.1:n.*1552C>G
ENST00000699241.1:c.*2087C>G	ENSP00000514230.1:n.*2087C>G
ENST00000699242.1:c.1805C>G	ENSP00000514231.1:p.Ala602Gly
ENST00000699243.1:c.*1239C>G	ENSP00000514232.1:n.*1239C>G
ENST00000699244.1:c.1748C>G	ENSP00000514233.1:p.Ala583Gly
ENST00000699245.1:n.1187C>G
ENST00000699246.1:c.*1266C>G	ENSP00000514234.1:n.*1266C>G
ENST00000699247.1:c.851C>G	ENSP00000514235.1:p.Ala284Gly
ENST00000699248.1:n.3784-4515C>G
ENST00000699249.1:c.*1058-4515C>G	ENSP00000514236.1:n.*1058-4515C>G
ENST00000699250.1:c.1714-4515C>G	ENSP00000514237.1:n.1714-4515C>G
ENST00000699251.1:c.1895C>G	ENSP00000514238.1:p.Ala632Gly
ENST00000699252.1:n.2445C>G
ENST00000398145.7:c.1895C>G MANE Select	ENSP00000381213.2:p.Ala632Gly
ENST00000336873.9:c.1895C>G	ENSP00000338457.5:p.Ala632Gly
ENST00000398145.6:c.1895C>G	ENSP00000381213.2:p.Ala632Gly
ENST00000402105.7:c.1880C>G	ENSP00000384185.3:p.Ala627Gly
ENST00000429411.5:c.*1467C>G	ENSP00000399705.1:n.*1467C>G
ENST00000439453.5:c.*1413C>G	ENSP00000406764.1:n.*1413C>G
ENST00000464362.5:c.*2226C>G	ENSP00000430291.1:n.*2226C>G
ENST00000466781.5:n.4754C>G
ENST00000485842.5:n.586C>G
ENST00000493455.6:n.458C>G
ENST00000496385.5:n.2480-4515C>G
ENST00000519774.5:n.281C>G
NM_022081.5:c.1895C>G , LRG_590t1:c.1895C>G	NP_071364.4:p.Ala632Gly
NM_152841.2:c.1880C>G , LRG_590t2:c.1880C>G	NP_690054.1:p.Ala627Gly
NR_073135.1:n.2581C>G
NR_073136.1:n.2343C>G
XM_006724353.2:c.1949C>G	XP_006724416.1:p.Ala650Gly
XM_006724354.2:c.1949C>G	XP_006724417.1:p.Ala650Gly
XM_006724360.2:c.1382C>G	XP_006724423.1:p.Ala461Gly
XM_011530485.1:c.2027C>G	XP_011528787.1:p.Ala676Gly
XM_011530486.1:c.2027C>G	XP_011528788.1:p.Ala676Gly
XM_011530487.1:c.2027C>G	XP_011528789.1:p.Ala676Gly
XM_011530488.1:c.2027C>G	XP_011528790.1:p.Ala676Gly
XM_011530489.1:c.2027C>G	XP_011528791.1:p.Ala676Gly
XM_011530490.1:c.1973C>G	XP_011528792.1:p.Ala658Gly
XM_011530491.1:c.2027C>G	XP_011528793.1:p.Ala676Gly
XM_011530492.1:c.2027C>G	XP_011528794.1:p.Ala676Gly
XM_011530493.1:c.1846-4515C>G	XP_011528795.1:n.1846-4515C>G
XM_011530494.1:c.1235C>G	XP_011528796.1:p.Ala412Gly
XM_011530495.1:c.1382C>G	XP_011528797.1:p.Ala461Gly
XM_011530496.1:c.1235C>G	XP_011528798.1:p.Ala412Gly
XR_937947.1:n.2686C>G
NM_001349896.1:c.1895C>G	NP_001336825.1:p.Ala632Gly
NM_001349898.1:c.1895C>G	NP_001336827.1:p.Ala632Gly
NM_001349899.1:c.1895C>G	NP_001336828.1:p.Ala632Gly
NM_001349900.1:c.1949C>G	NP_001336829.1:p.Ala650Gly
NM_001349901.1:c.1949C>G	NP_001336830.1:p.Ala650Gly
NM_001349902.1:c.1714-4515C>G	NP_001336831.1:n.1714-4515C>G
NM_001349903.1:c.1714-4515C>G	NP_001336832.1:n.1714-4515C>G
NM_001349904.1:c.1895C>G	NP_001336833.1:p.Ala632Gly
NM_001349905.1:c.1895C>G	NP_001336834.1:p.Ala632Gly
NR_146311.1:n.2672C>G
NR_146312.1:n.2497C>G
NR_146313.1:n.2517C>G
NR_146314.1:n.2648C>G
NR_146315.1:n.2588C>G
NR_146316.1:n.2563C>G
XM_006724360.3:c.1382C>G	XP_006724423.1:p.Ala461Gly
XM_011530485.2:c.2027C>G	XP_011528787.1:p.Ala676Gly
XM_011530486.2:c.2027C>G	XP_011528788.1:p.Ala676Gly
XM_011530487.2:c.2027C>G	XP_011528789.1:p.Ala676Gly
XM_011530488.2:c.2027C>G	XP_011528790.1:p.Ala676Gly
XM_011530489.2:c.2027C>G	XP_011528791.1:p.Ala676Gly
XM_011530490.3:c.1973C>G	XP_011528792.1:p.Ala658Gly
XM_011530491.3:c.2027C>G	XP_011528793.1:p.Ala676Gly
XM_011530492.2:c.2027C>G	XP_011528794.1:p.Ala676Gly
XM_011530493.3:c.1846-4515C>G	XP_011528795.1:n.1846-4515C>G
XM_011530494.2:c.1235C>G	XP_011528796.1:p.Ala412Gly
XM_011530495.2:c.1382C>G	XP_011528797.1:p.Ala461Gly
XM_011530496.2:c.1235C>G	XP_011528798.1:p.Ala412Gly
XM_017029045.2:c.1973C>G	XP_016884534.1:p.Ala658Gly
XM_017029046.2:c.1895C>G	XP_016884535.1:p.Ala632Gly
XM_017029047.2:c.1792-4515C>G	XP_016884536.1:n.1792-4515C>G
XM_017029052.2:c.1487C>G	XP_016884541.1:p.Ala496Gly
XM_017029053.1:c.1472C>G	XP_016884542.1:p.Ala491Gly
XM_017029056.2:c.1100C>G	XP_016884545.1:p.Ala367Gly
XM_017029061.2:c.1100C>G	XP_016884550.1:p.Ala367Gly
XM_017029062.2:c.1100C>G	XP_016884551.1:p.Ala367Gly
XM_017029063.2:c.1100C>G	XP_016884552.1:p.Ala367Gly
XM_017029064.2:c.1100C>G	XP_016884553.1:p.Ala367Gly
XM_024452298.1:c.1268C>G	XP_024308066.1:p.Ala423Gly
XM_024452299.1:c.1100C>G	XP_024308067.1:p.Ala367Gly
XM_024452300.1:c.1100C>G	XP_024308068.1:p.Ala367Gly
XR_001755361.2:n.2603C>G
XR_001755364.1:n.2278-4515C>G
XR_001755366.2:n.3132C>G
XR_002958721.1:n.2500-4515C>G
XR_937947.2:n.2681C>G
NM_001349898.2:c.1895C>G	NP_001336827.1:p.Ala632Gly
NM_001349899.2:c.1895C>G	NP_001336828.1:p.Ala632Gly
NM_001349900.2:c.1949C>G	NP_001336829.1:p.Ala650Gly
NM_001349903.2:c.1714-4515C>G	NP_001336832.1:n.1714-4515C>G
NM_001349904.2:c.1895C>G	NP_001336833.1:p.Ala632Gly
NR_073136.2:n.2150C>G
NR_146311.2:n.2592C>G
NR_146313.2:n.2437C>G
NR_146315.2:n.2508C>G
NM_022081.6:c.1895C>G MANE Select	NP_071364.4:p.Ala632Gly
NR_146316.2:n.2483C>G