Canonical Allele Identifier: CA411023924

Gene: HPS4

Linked Data

• MyVariant Identifiers: chr22:g.26853877G>C (hg19) ; chr22:g.26457911G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000022.11:g.26457911G>C , CM000684.2:g.26457911G>C	GRCh38
NC_000022.10:g.26853877G>C , CM000684.1:g.26853877G>C	GRCh37
NC_000022.9:g.25183877G>C	NCBI36
NG_009763.2:g.30953C>G , LRG_590:g.30953C>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000422379.3:c.1957C>G	ENSP00000415081.3:p.Leu653Val
ENST00000473782.2:c.1903C>G	ENSP00000514223.1:p.Leu635Val
ENST00000483631.2:c.1108C>G	ENSP00000514228.1:p.Leu370Val
ENST00000491142.2:c.1903C>G	ENSP00000514221.1:p.Leu635Val
ENST00000699226.1:n.4829C>G
ENST00000699227.1:c.*1247C>G	ENSP00000514220.1:n.*1247C>G
ENST00000699228.1:n.2453C>G
ENST00000699229.1:n.1320C>G
ENST00000699230.1:n.2626C>G
ENST00000699231.1:n.4915C>G
ENST00000699232.1:n.3259C>G
ENST00000699233.1:n.1774C>G
ENST00000699234.1:c.*1247C>G	ENSP00000514222.1:n.*1247C>G
ENST00000699235.1:c.1108C>G	ENSP00000514224.1:p.Leu370Val
ENST00000699236.1:c.*1092C>G	ENSP00000514225.1:n.*1092C>G
ENST00000699237.1:c.*1092C>G	ENSP00000514226.1:n.*1092C>G
ENST00000699238.1:c.*1446C>G	ENSP00000514227.1:n.*1446C>G
ENST00000699239.1:n.4657C>G
ENST00000699240.1:c.*1560C>G	ENSP00000514229.1:n.*1560C>G
ENST00000699241.1:c.*2095C>G	ENSP00000514230.1:n.*2095C>G
ENST00000699242.1:c.1813C>G	ENSP00000514231.1:p.Leu605Val
ENST00000699243.1:c.*1247C>G	ENSP00000514232.1:n.*1247C>G
ENST00000699244.1:c.1756C>G	ENSP00000514233.1:p.Leu586Val
ENST00000699245.1:n.1195C>G
ENST00000699246.1:c.*1274C>G	ENSP00000514234.1:n.*1274C>G
ENST00000699247.1:c.859C>G	ENSP00000514235.1:p.Leu287Val
ENST00000699248.1:n.3784-4507C>G
ENST00000699249.1:c.*1058-4507C>G	ENSP00000514236.1:n.*1058-4507C>G
ENST00000699250.1:c.1714-4507C>G	ENSP00000514237.1:n.1714-4507C>G
ENST00000699251.1:c.1903C>G	ENSP00000514238.1:p.Leu635Val
ENST00000699252.1:n.2453C>G
ENST00000398145.7:c.1903C>G MANE Select	ENSP00000381213.2:p.Leu635Val
ENST00000336873.9:c.1903C>G	ENSP00000338457.5:p.Leu635Val
ENST00000398145.6:c.1903C>G	ENSP00000381213.2:p.Leu635Val
ENST00000402105.7:c.1888C>G	ENSP00000384185.3:p.Leu630Val
ENST00000429411.5:c.*1475C>G	ENSP00000399705.1:n.*1475C>G
ENST00000439453.5:c.*1421C>G	ENSP00000406764.1:n.*1421C>G
ENST00000464362.5:c.*2234C>G	ENSP00000430291.1:n.*2234C>G
ENST00000466781.5:n.4762C>G
ENST00000485842.5:n.594C>G
ENST00000493455.6:n.466C>G
ENST00000496385.5:n.2480-4507C>G
ENST00000519774.5:n.289C>G
NM_022081.5:c.1903C>G , LRG_590t1:c.1903C>G	NP_071364.4:p.Leu635Val
NM_152841.2:c.1888C>G , LRG_590t2:c.1888C>G	NP_690054.1:p.Leu630Val
NR_073135.1:n.2589C>G
NR_073136.1:n.2351C>G
XM_006724353.2:c.1957C>G	XP_006724416.1:p.Leu653Val
XM_006724354.2:c.1957C>G	XP_006724417.1:p.Leu653Val
XM_006724360.2:c.1390C>G	XP_006724423.1:p.Leu464Val
XM_011530485.1:c.2035C>G	XP_011528787.1:p.Leu679Val
XM_011530486.1:c.2035C>G	XP_011528788.1:p.Leu679Val
XM_011530487.1:c.2035C>G	XP_011528789.1:p.Leu679Val
XM_011530488.1:c.2035C>G	XP_011528790.1:p.Leu679Val
XM_011530489.1:c.2035C>G	XP_011528791.1:p.Leu679Val
XM_011530490.1:c.1981C>G	XP_011528792.1:p.Leu661Val
XM_011530491.1:c.2035C>G	XP_011528793.1:p.Leu679Val
XM_011530492.1:c.2035C>G	XP_011528794.1:p.Leu679Val
XM_011530493.1:c.1846-4507C>G	XP_011528795.1:n.1846-4507C>G
XM_011530494.1:c.1243C>G	XP_011528796.1:p.Leu415Val
XM_011530495.1:c.1390C>G	XP_011528797.1:p.Leu464Val
XM_011530496.1:c.1243C>G	XP_011528798.1:p.Leu415Val
XR_937947.1:n.2694C>G
NM_001349896.1:c.1903C>G	NP_001336825.1:p.Leu635Val
NM_001349898.1:c.1903C>G	NP_001336827.1:p.Leu635Val
NM_001349899.1:c.1903C>G	NP_001336828.1:p.Leu635Val
NM_001349900.1:c.1957C>G	NP_001336829.1:p.Leu653Val
NM_001349901.1:c.1957C>G	NP_001336830.1:p.Leu653Val
NM_001349902.1:c.1714-4507C>G	NP_001336831.1:n.1714-4507C>G
NM_001349903.1:c.1714-4507C>G	NP_001336832.1:n.1714-4507C>G
NM_001349904.1:c.1903C>G	NP_001336833.1:p.Leu635Val
NM_001349905.1:c.1903C>G	NP_001336834.1:p.Leu635Val
NR_146311.1:n.2680C>G
NR_146312.1:n.2505C>G
NR_146313.1:n.2525C>G
NR_146314.1:n.2656C>G
NR_146315.1:n.2596C>G
NR_146316.1:n.2571C>G
XM_006724360.3:c.1390C>G	XP_006724423.1:p.Leu464Val
XM_011530485.2:c.2035C>G	XP_011528787.1:p.Leu679Val
XM_011530486.2:c.2035C>G	XP_011528788.1:p.Leu679Val
XM_011530487.2:c.2035C>G	XP_011528789.1:p.Leu679Val
XM_011530488.2:c.2035C>G	XP_011528790.1:p.Leu679Val
XM_011530489.2:c.2035C>G	XP_011528791.1:p.Leu679Val
XM_011530490.3:c.1981C>G	XP_011528792.1:p.Leu661Val
XM_011530491.3:c.2035C>G	XP_011528793.1:p.Leu679Val
XM_011530492.2:c.2035C>G	XP_011528794.1:p.Leu679Val
XM_011530493.3:c.1846-4507C>G	XP_011528795.1:n.1846-4507C>G
XM_011530494.2:c.1243C>G	XP_011528796.1:p.Leu415Val
XM_011530495.2:c.1390C>G	XP_011528797.1:p.Leu464Val
XM_011530496.2:c.1243C>G	XP_011528798.1:p.Leu415Val
XM_017029045.2:c.1981C>G	XP_016884534.1:p.Leu661Val
XM_017029046.2:c.1903C>G	XP_016884535.1:p.Leu635Val
XM_017029047.2:c.1792-4507C>G	XP_016884536.1:n.1792-4507C>G
XM_017029052.2:c.1495C>G	XP_016884541.1:p.Leu499Val
XM_017029053.1:c.1480C>G	XP_016884542.1:p.Leu494Val
XM_017029056.2:c.1108C>G	XP_016884545.1:p.Leu370Val
XM_017029061.2:c.1108C>G	XP_016884550.1:p.Leu370Val
XM_017029062.2:c.1108C>G	XP_016884551.1:p.Leu370Val
XM_017029063.2:c.1108C>G	XP_016884552.1:p.Leu370Val
XM_017029064.2:c.1108C>G	XP_016884553.1:p.Leu370Val
XM_024452298.1:c.1276C>G	XP_024308066.1:p.Leu426Val
XM_024452299.1:c.1108C>G	XP_024308067.1:p.Leu370Val
XM_024452300.1:c.1108C>G	XP_024308068.1:p.Leu370Val
XR_001755361.2:n.2611C>G
XR_001755364.1:n.2278-4507C>G
XR_001755366.2:n.3140C>G
XR_002958721.1:n.2500-4507C>G
XR_937947.2:n.2689C>G
NM_001349898.2:c.1903C>G	NP_001336827.1:p.Leu635Val
NM_001349899.2:c.1903C>G	NP_001336828.1:p.Leu635Val
NM_001349900.2:c.1957C>G	NP_001336829.1:p.Leu653Val
NM_001349903.2:c.1714-4507C>G	NP_001336832.1:n.1714-4507C>G
NM_001349904.2:c.1903C>G	NP_001336833.1:p.Leu635Val
NR_073136.2:n.2158C>G
NR_146311.2:n.2600C>G
NR_146313.2:n.2445C>G
NR_146315.2:n.2516C>G
NM_022081.6:c.1903C>G MANE Select	NP_071364.4:p.Leu635Val
NR_146316.2:n.2491C>G