Canonical Allele Identifier: CA389459541

Gene: NKX2-1 SFTA3

Linked Data

• dbSNP Id: rs2139407906
• MyVariant Identifiers: chr14:g.36987127T>A (hg19) ; chr14:g.36517922T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000014.9:g.36517922T>A , CM000676.2:g.36517922T>A	GRCh38
NC_000014.8:g.36987127T>A , CM000676.1:g.36987127T>A	GRCh37
NC_000014.7:g.36056878T>A	NCBI36
NG_013365.1:g.7304A>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000522719.4:c.472A>T (NKX2-1)	ENSP00000429519.4:p.Ser158Cys
ENST00000354822.7:c.562A>T (NKX2-1) MANE Select	ENSP00000346879.6:p.Ser188Cys
ENST00000521945.1:n.54+1546A>T
ENST00000522719.3:c.*599A>T (NKX2-1)	ENSP00000429519.3:n.*599A>T
ENST00000546983.2:c.373+1063A>T	ENSP00000449302.2:n.373+1063A>T
ENST00000354822.6:c.562A>T (NKX2-1)	ENSP00000346879.5:p.Ser188Cys
ENST00000498187.6:c.472A>T (NKX2-1)	ENSP00000429607.2:p.Ser158Cys
ENST00000518149.5:c.472A>T (NKX2-1)	ENSP00000428341.1:p.Ser158Cys
ENST00000522719.2:c.472A>T (NKX2-1)	ENSP00000429519.2:p.Ser158Cys
NM_001079668.2:c.562A>T (NKX2-1)	NP_001073136.1:p.Ser188Cys
NM_003317.3:c.472A>T (NKX2-1)	NP_003308.1:p.Ser158Cys
NM_001352986.1:c.-283+1546A>T (SFTA3)	NP_001339915.1:n.-283+1546A>T
NM_001352987.1:c.-237+1546A>T (SFTA3)	NP_001339916.1:n.-237+1546A>T
NM_001079668.3:c.562A>T (NKX2-1) MANE Select	NP_001073136.1:p.Ser188Cys
NM_003317.4:c.472A>T (NKX2-1)	NP_003308.1:p.Ser158Cys
NR_161364.1:n.89+1546A>T (SFTA3)
NR_161365.1:n.89+1546A>T (SFTA3)