Canonical Allele Identifier: CA373790391

Gene: SPTLC1

Linked Data

• gnomAD v4: 9-92038267-A-G
• MyVariant Identifiers: chr9:g.94800549A>G (hg19) ; chr9:g.92038267A>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000009.12:g.92038267A>G , CM000671.2:g.92038267A>G	GRCh38
NC_000009.11:g.94800549A>G , CM000671.1:g.94800549A>G	GRCh37
NC_000009.10:g.93840370A>G	NCBI36
NG_007950.1:g.82142T>C , LRG_272:g.82142T>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000482632.6:n.1645T>C
ENST00000686600.1:c.1235T>C	ENSP00000509268.1:p.Leu412Pro
ENST00000686799.1:n.1332T>C
ENST00000687427.1:c.1235T>C	ENSP00000509426.1:p.Leu412Pro
ENST00000687817.1:c.*1382T>C	ENSP00000508926.1:n.*1382T>C
ENST00000687972.1:c.1295T>C	ENSP00000509208.1:p.Leu432Pro
ENST00000689261.1:n.1142T>C
ENST00000689401.1:c.*1485T>C	ENSP00000510251.1:n.*1485T>C
ENST00000689423.1:c.*1485T>C	ENSP00000508519.1:n.*1485T>C
ENST00000690095.1:n.1623T>C
ENST00000690139.1:c.*936T>C	ENSP00000510483.1:n.*936T>C
ENST00000692458.1:n.1602T>C
ENST00000693147.1:c.*1251T>C	ENSP00000510358.1:n.*1251T>C
ENST00000262554.7:c.1235T>C MANE Select	ENSP00000262554.2:p.Leu412Pro
ENST00000642671.1:c.1536T>C	ENSP00000495764.1:n.1536T>C
ENST00000643599.1:c.1303T>C	ENSP00000494770.1:n.1303T>C
ENST00000644140.1:c.*976T>C	ENSP00000493933.1:n.*976T>C
ENST00000646481.1:c.1167T>C	ENSP00000496627.1:n.1167T>C
ENST00000646534.1:c.*1038T>C	ENSP00000495388.1:n.*1038T>C
ENST00000262554.6:c.1235T>C	ENSP00000262554.2:p.Leu412Pro
ENST00000469778.1:n.192T>C
NM_001281303.1:c.1235T>C	NP_001268232.1:p.Leu412Pro
NM_006415.3:c.1235T>C	NP_006406.1:p.Leu412Pro
XM_011518139.1:c.770T>C	XP_011516441.1:p.Leu257Pro
XM_011518139.3:c.770T>C	XP_011516441.1:p.Leu257Pro
XM_017014200.2:c.869T>C	XP_016869689.1:p.Leu290Pro
XM_017014201.2:c.869T>C	XP_016869690.1:p.Leu290Pro
XM_024447378.1:c.770T>C	XP_024303146.1:p.Leu257Pro
XM_024447379.1:c.770T>C	XP_024303147.1:p.Leu257Pro
XR_002956744.1:n.1385T>C
NM_006415.4:c.1235T>C MANE Select	NP_006406.1:p.Leu412Pro
NM_001281303.2:c.1235T>C	NP_001268232.1:p.Leu412Pro
NM_001368272.1:c.869T>C	NP_001355201.1:p.Leu290Pro
NM_001368273.1:c.770T>C	NP_001355202.1:p.Leu257Pro