Canonical Allele Identifier: CA366744696
Gene: PMS2 HGNC NCBI

Linked Data

MyVariant Identifiers: chr7:g.6043406A>T (hg19) chr7:g.6003775A>T (hg38)
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Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.6003775A>T , CM000669.2:g.6003775A>T GRCh38
NC_000007.13:g.6043406A>T , CM000669.1:g.6043406A>T GRCh37
NC_000007.12:g.6009932A>T NCBI36
NG_008466.1:g.10332T>A , LRG_161:g.10332T>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.250+197T>A ENSP00000514615.2:n.250+197T>A
ENST00000699840.2:c.268T>A ENSP00000514638.2:p.Ser90Thr
ENST00000699930.2:c.268T>A ENSP00000514695.2:p.Ser90Thr
ENST00000406569.8:c.268T>A ENSP00000514464.1:p.Ser90Thr
ENST00000415839.3:n.512T>A
ENST00000644110.2:c.250+197T>A ENSP00000496392.2:n.250+197T>A
ENST00000699752.1:c.268T>A ENSP00000514561.1:p.Ser90Thr
ENST00000699753.1:c.-138T>A ENSP00000514562.1:n.-138T>A
ENST00000699754.1:c.268T>A ENSP00000514563.1:p.Ser90Thr
ENST00000699755.1:c.-138T>A ENSP00000514564.1:n.-138T>A
ENST00000699756.1:c.268T>A ENSP00000514565.1:p.Ser90Thr
ENST00000699757.1:c.35+197T>A ENSP00000514566.1:n.35+197T>A
ENST00000699758.1:c.250+197T>A ENSP00000514567.1:n.250+197T>A
ENST00000699759.1:n.340T>A
ENST00000699760.1:c.35+197T>A ENSP00000514568.1:n.35+197T>A
ENST00000699761.1:c.-85T>A ENSP00000514569.1:n.-85T>A
ENST00000699762.1:c.-138T>A ENSP00000514570.1:n.-138T>A
ENST00000699763.1:c.-138T>A ENSP00000514571.1:n.-138T>A
ENST00000699764.1:c.268T>A ENSP00000514572.1:p.Ser90Thr
ENST00000699765.1:c.35+197T>A ENSP00000514573.1:n.35+197T>A
ENST00000699766.1:c.268T>A ENSP00000514574.1:p.Ser90Thr
ENST00000699767.1:c.268T>A ENSP00000514575.1:p.Ser90Thr
ENST00000699768.1:c.268T>A ENSP00000514576.1:p.Ser90Thr
ENST00000699769.1:n.348T>A
ENST00000699770.1:n.324T>A
ENST00000699811.1:c.-313T>A ENSP00000514614.1:n.-313T>A
ENST00000699814.1:c.174+197T>A
ENST00000699815.1:c.-138T>A ENSP00000514616.1:n.-138T>A
ENST00000699816.1:c.-138T>A ENSP00000514617.1:n.-138T>A
ENST00000699817.1:c.164-1139T>A ENSP00000514618.1:n.164-1139T>A
ENST00000699818.1:c.-138T>A ENSP00000514619.1:n.-138T>A
ENST00000699819.1:c.-151T>A ENSP00000514620.1:n.-151T>A
ENST00000699820.1:c.268T>A ENSP00000514621.1:p.Ser90Thr
ENST00000699821.1:c.-138T>A ENSP00000514622.1:n.-138T>A
ENST00000699822.1:c.-138T>A ENSP00000514623.1:n.-138T>A
ENST00000699823.1:c.-85T>A ENSP00000514624.1:n.-85T>A
ENST00000699824.1:c.268T>A ENSP00000514625.1:p.Ser90Thr
ENST00000699825.1:c.-138T>A ENSP00000514626.1:n.-138T>A
ENST00000699826.1:c.-138T>A ENSP00000514627.1:n.-138T>A
ENST00000699827.1:c.268T>A ENSP00000514628.1:p.Ser90Thr
ENST00000699828.1:c.268T>A ENSP00000514629.1:p.Ser90Thr
ENST00000699829.1:c.-85T>A ENSP00000514630.1:n.-85T>A
ENST00000699830.1:c.268T>A ENSP00000514631.1:p.Ser90Thr
ENST00000699831.1:n.229T>A
ENST00000699833.1:n.348T>A
ENST00000699834.1:n.474T>A
ENST00000699837.1:c.-53+197T>A ENSP00000514635.1:n.-53+197T>A
ENST00000699838.1:c.*168T>A ENSP00000514636.1:n.*168T>A
ENST00000699839.1:c.454T>A ENSP00000514637.1:p.Ser152Thr
ENST00000699840.1:c.268T>A ENSP00000514638.1:p.Ser90Thr
ENST00000699916.1:c.-138T>A ENSP00000514684.1:n.-138T>A
ENST00000699917.1:c.268T>A ENSP00000514685.1:p.Ser90Thr
ENST00000699918.1:c.268T>A ENSP00000514686.1:p.Ser90Thr
ENST00000699919.1:c.268T>A ENSP00000514687.1:p.Ser90Thr
ENST00000699920.1:c.268T>A ENSP00000514688.1:p.Ser90Thr
ENST00000699928.1:c.268T>A ENSP00000514693.1:p.Ser90Thr
ENST00000699929.1:c.268T>A ENSP00000514694.1:p.Ser90Thr
ENST00000699930.1:c.268T>A ENSP00000514695.1:p.Ser90Thr
ENST00000699931.1:n.379T>A
ENST00000699932.1:c.268T>A ENSP00000514696.1:p.Ser90Thr
ENST00000699933.1:n.348T>A
ENST00000699951.1:c.268T>A ENSP00000514706.1:p.Ser90Thr
ENST00000699952.1:c.268T>A ENSP00000514707.1:p.Ser90Thr
ENST00000699953.1:c.268T>A ENSP00000514708.1:p.Ser90Thr
ENST00000699954.1:c.268T>A ENSP00000514709.1:p.Ser90Thr
ENST00000703409.1:n.467T>A
ENST00000265849.12:c.268T>A MANE Select ENSP00000265849.7:p.Ser90Thr
ENST00000642292.1:c.-138T>A ENSP00000495524.1:n.-138T>A
ENST00000642456.1:c.-138T>A ENSP00000493814.1:n.-138T>A
ENST00000643595.1:c.268T>A ENSP00000494497.1:p.Ser90Thr
ENST00000644110.1:c.35+197T>A ENSP00000496392.1:n.35+197T>A
ENST00000265849.11:c.268T>A ENSP00000265849.7:p.Ser90Thr
ENST00000380416.5:n.347T>A
ENST00000382321.5:c.268T>A ENSP00000371758.4:p.Ser90Thr
ENST00000406569.7:n.268T>A
ENST00000415839.2:n.459T>A
ENST00000441476.6:c.35+197T>A ENSP00000392843.2:n.35+197T>A
ENST00000469652.1:n.62+2218T>A
NM_000535.5:c.268T>A , LRG_161t1:c.268T>A NP_000526.1:p.Ser90Thr
NR_003085.2:n.350T>A
XM_006715742.2:c.262T>A XP_006715805.1:p.Ser88Thr
XM_011515427.1:c.313T>A XP_011513729.1:p.Ser105Thr
XM_011515428.1:c.313T>A XP_011513730.1:p.Ser105Thr
XM_011515429.1:c.35+197T>A XP_011513731.1:n.35+197T>A
XM_011515430.1:c.35+197T>A XP_011513732.1:n.35+197T>A
NM_000535.6:c.268T>A NP_000526.2:p.Ser90Thr
NM_001322003.1:c.-138T>A NP_001308932.1:n.-138T>A
NM_001322004.1:c.-138T>A NP_001308933.1:n.-138T>A
NM_001322005.1:c.-138T>A NP_001308934.1:n.-138T>A
NM_001322006.1:c.268T>A NP_001308935.1:p.Ser90Thr
NM_001322007.1:c.35+197T>A NP_001308936.1:n.35+197T>A
NM_001322008.1:c.35+197T>A NP_001308937.1:n.35+197T>A
NM_001322009.1:c.-138T>A NP_001308938.1:n.-138T>A
NM_001322010.1:c.-138T>A NP_001308939.1:n.-138T>A
NM_001322011.1:c.-617T>A NP_001308940.1:n.-617T>A
NM_001322012.1:c.-617T>A NP_001308941.1:n.-617T>A
NM_001322013.1:c.-138T>A NP_001308942.1:n.-138T>A
NM_001322014.1:c.268T>A NP_001308943.1:p.Ser90Thr
NM_001322015.1:c.-217T>A NP_001308944.1:n.-217T>A
NR_136154.1:n.355T>A
XM_017012342.2:c.-517T>A XP_016867831.1:n.-517T>A
XM_024446800.1:c.-138T>A XP_024302568.1:n.-138T>A
NM_000535.7:c.268T>A MANE Select NP_000526.2:p.Ser90Thr
NM_001322003.2:c.-138T>A NP_001308932.1:n.-138T>A
NM_001322004.2:c.-138T>A NP_001308933.1:n.-138T>A
NM_001322005.2:c.-138T>A NP_001308934.1:n.-138T>A
NM_001322006.2:c.268T>A NP_001308935.1:p.Ser90Thr
NM_001322008.2:c.35+197T>A NP_001308937.1:n.35+197T>A
NM_001322009.2:c.-138T>A NP_001308938.1:n.-138T>A
NM_001322010.2:c.-138T>A NP_001308939.1:n.-138T>A
NM_001322011.2:c.-617T>A NP_001308940.1:n.-617T>A
NM_001322012.2:c.-617T>A NP_001308941.1:n.-617T>A
NM_001322013.2:c.-138T>A NP_001308942.1:n.-138T>A
NM_001322014.2:c.268T>A NP_001308943.1:p.Ser90Thr
NM_001322015.2:c.-217T>A NP_001308944.1:n.-217T>A
NM_001322007.2:c.35+197T>A NP_001308936.1:n.35+197T>A
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