Canonical Allele Identifier: CA366739464

Gene: PMS2

Linked Data

• ClinVar Variation Id: 484272
• ClinVar RCV Id: RCV000571604
• dbSNP Id: rs786203121
• MyVariant Identifiers: chr7:g.6026519G>C (hg19) ; chr7:g.5986888G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5986888G>C , CM000669.2:g.5986888G>C	GRCh38
NC_000007.13:g.6026519G>C , CM000669.1:g.6026519G>C	GRCh37
NC_000007.12:g.5993045G>C	NCBI36
NG_008466.1:g.27219C>G , LRG_161:g.27219C>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000699814.2:c.*1273C>G	ENSP00000514615.2:n.*1273C>G
ENST00000699840.2:c.1874C>G	ENSP00000514638.2:p.Ala625Gly
ENST00000699930.2:c.1769C>G	ENSP00000514695.2:p.Ala590Gly
ENST00000406569.8:c.1678+199C>G	ENSP00000514464.1:n.1678+199C>G
ENST00000644110.2:c.*1471C>G	ENSP00000496392.2:n.*1471C>G
ENST00000699752.1:c.1721C>G	ENSP00000514561.1:p.Ala574Gly
ENST00000699753.1:c.*1298C>G	ENSP00000514562.1:n.*1298C>G
ENST00000699754.1:c.1679C>G	ENSP00000514563.1:p.Ala560Gly
ENST00000699755.1:c.*1276C>G	ENSP00000514564.1:n.*1276C>G
ENST00000699756.1:c.*1464C>G	ENSP00000514565.1:n.*1464C>G
ENST00000699757.1:c.*1134C>G	ENSP00000514566.1:n.*1134C>G
ENST00000699758.1:c.*1134C>G	ENSP00000514567.1:n.*1134C>G
ENST00000699759.1:n.2731C>G
ENST00000699760.1:c.1559C>G	ENSP00000514568.1:p.Ala520Gly
ENST00000699761.1:c.1472C>G	ENSP00000514569.1:p.Ala491Gly
ENST00000699762.1:c.1304C>G	ENSP00000514570.1:p.Ala435Gly
ENST00000699763.1:c.*967C>G	ENSP00000514571.1:n.*967C>G
ENST00000699764.1:c.*195C>G	ENSP00000514572.1:n.*195C>G
ENST00000699765.1:c.*973C>G	ENSP00000514573.1:n.*973C>G
ENST00000699766.1:c.1877C>G	ENSP00000514574.1:p.Ala626Gly
ENST00000699767.1:c.1877C>G	ENSP00000514575.1:p.Ala626Gly
ENST00000699768.1:c.1877C>G	ENSP00000514576.1:p.Ala626Gly
ENST00000699811.1:c.1472C>G	ENSP00000514614.1:p.Ala491Gly
ENST00000699813.1:n.1990C>G
ENST00000699814.1:c.1500C>G
ENST00000699815.1:c.*1408C>G	ENSP00000514616.1:n.*1408C>G
ENST00000699816.1:c.*767C>G	ENSP00000514617.1:n.*767C>G
ENST00000699817.1:c.*1471C>G	ENSP00000514618.1:n.*1471C>G
ENST00000699818.1:c.1472C>G	ENSP00000514619.1:p.Ala491Gly
ENST00000699819.1:c.*1034C>G	ENSP00000514620.1:n.*1034C>G
ENST00000699820.1:c.1144+2912C>G	ENSP00000514621.1:n.1144+2912C>G
ENST00000699821.1:c.1472C>G	ENSP00000514622.1:p.Ala491Gly
ENST00000699822.1:c.*1329C>G	ENSP00000514623.1:n.*1329C>G
ENST00000699823.1:c.1472C>G	ENSP00000514624.1:p.Ala491Gly
ENST00000699824.1:c.*1380C>G	ENSP00000514625.1:n.*1380C>G
ENST00000699825.1:c.1316C>G	ENSP00000514626.1:p.Ala439Gly
ENST00000699826.1:c.*1276C>G	ENSP00000514627.1:n.*1276C>G
ENST00000699827.1:c.1709C>G	ENSP00000514628.1:p.Ala570Gly
ENST00000699828.1:c.*967C>G	ENSP00000514629.1:n.*967C>G
ENST00000699833.1:n.3649C>G
ENST00000699837.1:c.1472C>G	ENSP00000514635.1:p.Ala491Gly
ENST00000699838.1:c.*1777C>G	ENSP00000514636.1:n.*1777C>G
ENST00000699839.1:c.2063C>G	ENSP00000514637.1:p.Ala688Gly
ENST00000699916.1:c.*1134C>G	ENSP00000514684.1:n.*1134C>G
ENST00000699917.1:c.*1326C>G	ENSP00000514685.1:n.*1326C>G
ENST00000699918.1:c.*1378C>G	ENSP00000514686.1:n.*1378C>G
ENST00000699919.1:c.*1464C>G	ENSP00000514687.1:n.*1464C>G
ENST00000699920.1:c.*1513C>G	ENSP00000514688.1:n.*1513C>G
ENST00000699928.1:c.989-3897C>G	ENSP00000514693.1:n.989-3897C>G
ENST00000699951.1:c.*973C>G	ENSP00000514706.1:n.*973C>G
ENST00000699952.1:c.803+10438C>G	ENSP00000514707.1:n.803+10438C>G
ENST00000265849.12:c.1877C>G MANE Select	ENSP00000265849.7:p.Ala626Gly
ENST00000642292.1:c.1472C>G	ENSP00000495524.1:p.Ala491Gly
ENST00000642456.1:c.1472C>G	ENSP00000493814.1:p.Ala491Gly
ENST00000643595.1:c.*1276C>G	ENSP00000494497.1:n.*1276C>G
ENST00000644110.1:c.1559C>G	ENSP00000496392.1:p.Ala520Gly
ENST00000265849.11:c.1877C>G	ENSP00000265849.7:p.Ala626Gly
ENST00000382321.5:c.804-3897C>G	ENSP00000371758.4:n.804-3897C>G
ENST00000406569.7:n.1678+199C>G
ENST00000441476.6:c.1559C>G	ENSP00000392843.2:p.Ala520Gly
ENST00000469652.1:n.63-3983C>G
NM_000535.5:c.1877C>G , LRG_161t1:c.1877C>G	NP_000526.1:p.Ala626Gly
NR_003085.2:n.1959C>G
XM_006715742.2:c.1871C>G	XP_006715805.1:p.Ala624Gly
XM_006715744.2:c.944C>G	XP_006715807.1:p.Ala315Gly
XM_011515427.1:c.1922C>G	XP_011513729.1:p.Ala641Gly
XM_011515428.1:c.1766C>G	XP_011513730.1:p.Ala589Gly
XM_011515429.1:c.1559C>G	XP_011513731.1:p.Ala520Gly
XM_011515430.1:c.1559C>G	XP_011513732.1:p.Ala520Gly
NM_000535.6:c.1877C>G	NP_000526.2:p.Ala626Gly
NM_001322003.1:c.1472C>G	NP_001308932.1:p.Ala491Gly
NM_001322004.1:c.1472C>G	NP_001308933.1:p.Ala491Gly
NM_001322005.1:c.1472C>G	NP_001308934.1:p.Ala491Gly
NM_001322006.1:c.1721C>G	NP_001308935.1:p.Ala574Gly
NM_001322007.1:c.1559C>G	NP_001308936.1:p.Ala520Gly
NM_001322008.1:c.1559C>G	NP_001308937.1:p.Ala520Gly
NM_001322009.1:c.1472C>G	NP_001308938.1:p.Ala491Gly
NM_001322010.1:c.1316C>G	NP_001308939.1:p.Ala439Gly
NM_001322011.1:c.944C>G	NP_001308940.1:p.Ala315Gly
NM_001322012.1:c.944C>G	NP_001308941.1:p.Ala315Gly
NM_001322013.1:c.1304C>G	NP_001308942.1:p.Ala435Gly
NM_001322014.1:c.1877C>G	NP_001308943.1:p.Ala626Gly
NM_001322015.1:c.1568C>G	NP_001308944.1:p.Ala523Gly
NR_136154.1:n.1964C>G
XM_006715744.4:c.944C>G	XP_006715807.1:p.Ala315Gly
XM_017012342.2:c.944C>G	XP_016867831.1:p.Ala315Gly
XM_024446800.1:c.1316C>G	XP_024302568.1:p.Ala439Gly
NM_000535.7:c.1877C>G MANE Select	NP_000526.2:p.Ala626Gly
NM_001322003.2:c.1472C>G	NP_001308932.1:p.Ala491Gly
NM_001322004.2:c.1472C>G	NP_001308933.1:p.Ala491Gly
NM_001322005.2:c.1472C>G	NP_001308934.1:p.Ala491Gly
NM_001322006.2:c.1721C>G	NP_001308935.1:p.Ala574Gly
NM_001322008.2:c.1559C>G	NP_001308937.1:p.Ala520Gly
NM_001322009.2:c.1472C>G	NP_001308938.1:p.Ala491Gly
NM_001322010.2:c.1316C>G	NP_001308939.1:p.Ala439Gly
NM_001322011.2:c.944C>G	NP_001308940.1:p.Ala315Gly
NM_001322012.2:c.944C>G	NP_001308941.1:p.Ala315Gly
NM_001322013.2:c.1304C>G	NP_001308942.1:p.Ala435Gly
NM_001322014.2:c.1877C>G	NP_001308943.1:p.Ala626Gly
NM_001322015.2:c.1568C>G	NP_001308944.1:p.Ala523Gly
NM_001322007.2:c.1559C>G	NP_001308936.1:p.Ala520Gly