Canonical Allele Identifier: CA366739024

Gene: PMS2

Linked Data

• MyVariant Identifiers: chr7:g.6026427T>A (hg19) ; chr7:g.5986796T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5986796T>A , CM000669.2:g.5986796T>A	GRCh38
NC_000007.13:g.6026427T>A , CM000669.1:g.6026427T>A	GRCh37
NC_000007.12:g.5992953T>A	NCBI36
NG_008466.1:g.27311A>T , LRG_161:g.27311A>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000699814.2:c.*1365A>T	ENSP00000514615.2:n.*1365A>T
ENST00000699840.2:c.1966A>T	ENSP00000514638.2:p.Asn656Tyr
ENST00000699930.2:c.1861A>T	ENSP00000514695.2:p.Asn621Tyr
ENST00000406569.8:c.1678+291A>T	ENSP00000514464.1:n.1678+291A>T
ENST00000644110.2:c.*1563A>T	ENSP00000496392.2:n.*1563A>T
ENST00000699752.1:c.1813A>T	ENSP00000514561.1:p.Asn605Tyr
ENST00000699753.1:c.*1390A>T	ENSP00000514562.1:n.*1390A>T
ENST00000699754.1:c.1771A>T	ENSP00000514563.1:p.Asn591Tyr
ENST00000699755.1:c.*1368A>T	ENSP00000514564.1:n.*1368A>T
ENST00000699756.1:c.*1556A>T	ENSP00000514565.1:n.*1556A>T
ENST00000699757.1:c.*1226A>T	ENSP00000514566.1:n.*1226A>T
ENST00000699758.1:c.*1226A>T	ENSP00000514567.1:n.*1226A>T
ENST00000699759.1:n.2823A>T
ENST00000699760.1:c.1651A>T	ENSP00000514568.1:p.Asn551Tyr
ENST00000699761.1:c.1564A>T	ENSP00000514569.1:p.Asn522Tyr
ENST00000699762.1:c.1396A>T	ENSP00000514570.1:p.Asn466Tyr
ENST00000699763.1:c.*1059A>T	ENSP00000514571.1:n.*1059A>T
ENST00000699764.1:c.*287A>T	ENSP00000514572.1:n.*287A>T
ENST00000699765.1:c.*1065A>T	ENSP00000514573.1:n.*1065A>T
ENST00000699766.1:c.1969A>T	ENSP00000514574.1:p.Asn657Tyr
ENST00000699767.1:c.1969A>T	ENSP00000514575.1:p.Asn657Tyr
ENST00000699768.1:c.1969A>T	ENSP00000514576.1:p.Asn657Tyr
ENST00000699811.1:c.1564A>T	ENSP00000514614.1:p.Asn522Tyr
ENST00000699813.1:n.2082A>T
ENST00000699814.1:c.1592A>T
ENST00000699815.1:c.*1500A>T	ENSP00000514616.1:n.*1500A>T
ENST00000699816.1:c.*859A>T	ENSP00000514617.1:n.*859A>T
ENST00000699817.1:c.*1563A>T	ENSP00000514618.1:n.*1563A>T
ENST00000699818.1:c.1564A>T	ENSP00000514619.1:p.Asn522Tyr
ENST00000699819.1:c.*1126A>T	ENSP00000514620.1:n.*1126A>T
ENST00000699820.1:c.1144+3004A>T	ENSP00000514621.1:n.1144+3004A>T
ENST00000699821.1:c.1564A>T	ENSP00000514622.1:p.Asn522Tyr
ENST00000699822.1:c.*1421A>T	ENSP00000514623.1:n.*1421A>T
ENST00000699823.1:c.1564A>T	ENSP00000514624.1:p.Asn522Tyr
ENST00000699824.1:c.*1472A>T	ENSP00000514625.1:n.*1472A>T
ENST00000699825.1:c.1408A>T	ENSP00000514626.1:p.Asn470Tyr
ENST00000699826.1:c.*1368A>T	ENSP00000514627.1:n.*1368A>T
ENST00000699827.1:c.1801A>T	ENSP00000514628.1:p.Asn601Tyr
ENST00000699828.1:c.*1059A>T	ENSP00000514629.1:n.*1059A>T
ENST00000699833.1:n.3741A>T
ENST00000699837.1:c.1564A>T	ENSP00000514635.1:p.Asn522Tyr
ENST00000699838.1:c.*1869A>T	ENSP00000514636.1:n.*1869A>T
ENST00000699839.1:c.2155A>T	ENSP00000514637.1:p.Asn719Tyr
ENST00000699916.1:c.*1226A>T	ENSP00000514684.1:n.*1226A>T
ENST00000699917.1:c.*1418A>T	ENSP00000514685.1:n.*1418A>T
ENST00000699918.1:c.*1470A>T	ENSP00000514686.1:n.*1470A>T
ENST00000699919.1:c.*1556A>T	ENSP00000514687.1:n.*1556A>T
ENST00000699920.1:c.*1605A>T	ENSP00000514688.1:n.*1605A>T
ENST00000699928.1:c.989-3805A>T	ENSP00000514693.1:n.989-3805A>T
ENST00000699951.1:c.*1065A>T	ENSP00000514706.1:n.*1065A>T
ENST00000699952.1:c.803+10530A>T	ENSP00000514707.1:n.803+10530A>T
ENST00000265849.12:c.1969A>T MANE Select	ENSP00000265849.7:p.Asn657Tyr
ENST00000642292.1:c.1564A>T	ENSP00000495524.1:p.Asn522Tyr
ENST00000642456.1:c.1564A>T	ENSP00000493814.1:p.Asn522Tyr
ENST00000643595.1:c.*1368A>T	ENSP00000494497.1:n.*1368A>T
ENST00000644110.1:c.1651A>T	ENSP00000496392.1:p.Asn551Tyr
ENST00000265849.11:c.1969A>T	ENSP00000265849.7:p.Asn657Tyr
ENST00000382321.5:c.804-3805A>T	ENSP00000371758.4:n.804-3805A>T
ENST00000406569.7:n.1678+291A>T
ENST00000441476.6:c.1651A>T	ENSP00000392843.2:p.Asn551Tyr
ENST00000469652.1:n.63-3891A>T
NM_000535.5:c.1969A>T , LRG_161t1:c.1969A>T	NP_000526.1:p.Asn657Tyr
NR_003085.2:n.2051A>T
XM_006715742.2:c.1963A>T	XP_006715805.1:p.Asn655Tyr
XM_006715744.2:c.1036A>T	XP_006715807.1:p.Asn346Tyr
XM_011515427.1:c.2014A>T	XP_011513729.1:p.Asn672Tyr
XM_011515428.1:c.1858A>T	XP_011513730.1:p.Asn620Tyr
XM_011515429.1:c.1651A>T	XP_011513731.1:p.Asn551Tyr
XM_011515430.1:c.1651A>T	XP_011513732.1:p.Asn551Tyr
NM_000535.6:c.1969A>T	NP_000526.2:p.Asn657Tyr
NM_001322003.1:c.1564A>T	NP_001308932.1:p.Asn522Tyr
NM_001322004.1:c.1564A>T	NP_001308933.1:p.Asn522Tyr
NM_001322005.1:c.1564A>T	NP_001308934.1:p.Asn522Tyr
NM_001322006.1:c.1813A>T	NP_001308935.1:p.Asn605Tyr
NM_001322007.1:c.1651A>T	NP_001308936.1:p.Asn551Tyr
NM_001322008.1:c.1651A>T	NP_001308937.1:p.Asn551Tyr
NM_001322009.1:c.1564A>T	NP_001308938.1:p.Asn522Tyr
NM_001322010.1:c.1408A>T	NP_001308939.1:p.Asn470Tyr
NM_001322011.1:c.1036A>T	NP_001308940.1:p.Asn346Tyr
NM_001322012.1:c.1036A>T	NP_001308941.1:p.Asn346Tyr
NM_001322013.1:c.1396A>T	NP_001308942.1:p.Asn466Tyr
NM_001322014.1:c.1969A>T	NP_001308943.1:p.Asn657Tyr
NM_001322015.1:c.1660A>T	NP_001308944.1:p.Asn554Tyr
NR_136154.1:n.2056A>T
XM_006715744.4:c.1036A>T	XP_006715807.1:p.Asn346Tyr
XM_017012342.2:c.1036A>T	XP_016867831.1:p.Asn346Tyr
XM_024446800.1:c.1408A>T	XP_024302568.1:p.Asn470Tyr
NM_000535.7:c.1969A>T MANE Select	NP_000526.2:p.Asn657Tyr
NM_001322003.2:c.1564A>T	NP_001308932.1:p.Asn522Tyr
NM_001322004.2:c.1564A>T	NP_001308933.1:p.Asn522Tyr
NM_001322005.2:c.1564A>T	NP_001308934.1:p.Asn522Tyr
NM_001322006.2:c.1813A>T	NP_001308935.1:p.Asn605Tyr
NM_001322008.2:c.1651A>T	NP_001308937.1:p.Asn551Tyr
NM_001322009.2:c.1564A>T	NP_001308938.1:p.Asn522Tyr
NM_001322010.2:c.1408A>T	NP_001308939.1:p.Asn470Tyr
NM_001322011.2:c.1036A>T	NP_001308940.1:p.Asn346Tyr
NM_001322012.2:c.1036A>T	NP_001308941.1:p.Asn346Tyr
NM_001322013.2:c.1396A>T	NP_001308942.1:p.Asn466Tyr
NM_001322014.2:c.1969A>T	NP_001308943.1:p.Asn657Tyr
NM_001322015.2:c.1660A>T	NP_001308944.1:p.Asn554Tyr
NM_001322007.2:c.1651A>T	NP_001308936.1:p.Asn551Tyr