Canonical Allele Identifier: CA366738940
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 1321000
dbSNP Id: rs1554297061

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5986778C>T , CM000669.2:g.5986778C>T GRCh38
NC_000007.13:g.6026409C>T , CM000669.1:g.6026409C>T GRCh37
NC_000007.12:g.5992935C>T NCBI36
NG_008466.1:g.27329G>A , LRG_161:g.27329G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1383G>A ENSP00000514615.2:n.*1383G>A
ENST00000699840.2:c.1984G>A ENSP00000514638.2:p.Glu662Lys
ENST00000699930.2:c.1879G>A ENSP00000514695.2:p.Glu627Lys
ENST00000406569.8:c.1678+309G>A ENSP00000514464.1:n.1678+309G>A
ENST00000644110.2:c.*1581G>A ENSP00000496392.2:n.*1581G>A
ENST00000699752.1:c.1831G>A ENSP00000514561.1:p.Glu611Lys
ENST00000699753.1:c.*1408G>A ENSP00000514562.1:n.*1408G>A
ENST00000699754.1:c.1789G>A ENSP00000514563.1:p.Glu597Lys
ENST00000699755.1:c.*1386G>A ENSP00000514564.1:n.*1386G>A
ENST00000699756.1:c.*1574G>A ENSP00000514565.1:n.*1574G>A
ENST00000699757.1:c.*1244G>A ENSP00000514566.1:n.*1244G>A
ENST00000699758.1:c.*1244G>A ENSP00000514567.1:n.*1244G>A
ENST00000699759.1:n.2841G>A
ENST00000699760.1:c.1669G>A ENSP00000514568.1:p.Glu557Lys
ENST00000699761.1:c.1582G>A ENSP00000514569.1:p.Glu528Lys
ENST00000699762.1:c.1414G>A ENSP00000514570.1:p.Glu472Lys
ENST00000699763.1:c.*1077G>A ENSP00000514571.1:n.*1077G>A
ENST00000699764.1:c.*305G>A ENSP00000514572.1:n.*305G>A
ENST00000699765.1:c.*1083G>A ENSP00000514573.1:n.*1083G>A
ENST00000699766.1:c.1987G>A ENSP00000514574.1:p.Glu663Lys
ENST00000699767.1:c.1987G>A ENSP00000514575.1:p.Glu663Lys
ENST00000699768.1:c.1987G>A ENSP00000514576.1:p.Glu663Lys
ENST00000699811.1:c.1582G>A ENSP00000514614.1:p.Glu528Lys
ENST00000699813.1:n.2100G>A
ENST00000699814.1:c.1610G>A
ENST00000699815.1:c.*1518G>A ENSP00000514616.1:n.*1518G>A
ENST00000699816.1:c.*877G>A ENSP00000514617.1:n.*877G>A
ENST00000699817.1:c.*1581G>A ENSP00000514618.1:n.*1581G>A
ENST00000699818.1:c.1582G>A ENSP00000514619.1:p.Glu528Lys
ENST00000699819.1:c.*1144G>A ENSP00000514620.1:n.*1144G>A
ENST00000699820.1:c.1144+3022G>A ENSP00000514621.1:n.1144+3022G>A
ENST00000699821.1:c.1582G>A ENSP00000514622.1:p.Glu528Lys
ENST00000699822.1:c.*1439G>A ENSP00000514623.1:n.*1439G>A
ENST00000699823.1:c.1582G>A ENSP00000514624.1:p.Glu528Lys
ENST00000699824.1:c.*1490G>A ENSP00000514625.1:n.*1490G>A
ENST00000699825.1:c.1426G>A ENSP00000514626.1:p.Glu476Lys
ENST00000699826.1:c.*1386G>A ENSP00000514627.1:n.*1386G>A
ENST00000699827.1:c.1819G>A ENSP00000514628.1:p.Glu607Lys
ENST00000699828.1:c.*1077G>A ENSP00000514629.1:n.*1077G>A
ENST00000699833.1:n.3759G>A
ENST00000699837.1:c.1582G>A ENSP00000514635.1:p.Glu528Lys
ENST00000699838.1:c.*1887G>A ENSP00000514636.1:n.*1887G>A
ENST00000699839.1:c.2173G>A ENSP00000514637.1:p.Glu725Lys
ENST00000699916.1:c.*1244G>A ENSP00000514684.1:n.*1244G>A
ENST00000699917.1:c.*1436G>A ENSP00000514685.1:n.*1436G>A
ENST00000699918.1:c.*1488G>A ENSP00000514686.1:n.*1488G>A
ENST00000699919.1:c.*1574G>A ENSP00000514687.1:n.*1574G>A
ENST00000699920.1:c.*1623G>A ENSP00000514688.1:n.*1623G>A
ENST00000699928.1:c.989-3787G>A ENSP00000514693.1:n.989-3787G>A
ENST00000699951.1:c.*1083G>A ENSP00000514706.1:n.*1083G>A
ENST00000699952.1:c.803+10548G>A ENSP00000514707.1:n.803+10548G>A
ENST00000265849.12:c.1987G>A MANE Select ENSP00000265849.7:p.Glu663Lys
ENST00000642292.1:c.1582G>A ENSP00000495524.1:p.Glu528Lys
ENST00000642456.1:c.1582G>A ENSP00000493814.1:p.Glu528Lys
ENST00000643595.1:c.*1386G>A ENSP00000494497.1:n.*1386G>A
ENST00000644110.1:c.1669G>A ENSP00000496392.1:p.Glu557Lys
ENST00000265849.11:c.1987G>A ENSP00000265849.7:p.Glu663Lys
ENST00000382321.5:c.804-3787G>A ENSP00000371758.4:n.804-3787G>A
ENST00000406569.7:n.1678+309G>A
ENST00000441476.6:c.1669G>A ENSP00000392843.2:p.Glu557Lys
ENST00000469652.1:n.63-3873G>A
NM_000535.5:c.1987G>A , LRG_161t1:c.1987G>A NP_000526.1:p.Glu663Lys
NR_003085.2:n.2069G>A
XM_006715742.2:c.1981G>A XP_006715805.1:p.Glu661Lys
XM_006715744.2:c.1054G>A XP_006715807.1:p.Glu352Lys
XM_011515427.1:c.2032G>A XP_011513729.1:p.Glu678Lys
XM_011515428.1:c.1876G>A XP_011513730.1:p.Glu626Lys
XM_011515429.1:c.1669G>A XP_011513731.1:p.Glu557Lys
XM_011515430.1:c.1669G>A XP_011513732.1:p.Glu557Lys
NM_000535.6:c.1987G>A NP_000526.2:p.Glu663Lys
NM_001322003.1:c.1582G>A NP_001308932.1:p.Glu528Lys
NM_001322004.1:c.1582G>A NP_001308933.1:p.Glu528Lys
NM_001322005.1:c.1582G>A NP_001308934.1:p.Glu528Lys
NM_001322006.1:c.1831G>A NP_001308935.1:p.Glu611Lys
NM_001322007.1:c.1669G>A NP_001308936.1:p.Glu557Lys
NM_001322008.1:c.1669G>A NP_001308937.1:p.Glu557Lys
NM_001322009.1:c.1582G>A NP_001308938.1:p.Glu528Lys
NM_001322010.1:c.1426G>A NP_001308939.1:p.Glu476Lys
NM_001322011.1:c.1054G>A NP_001308940.1:p.Glu352Lys
NM_001322012.1:c.1054G>A NP_001308941.1:p.Glu352Lys
NM_001322013.1:c.1414G>A NP_001308942.1:p.Glu472Lys
NM_001322014.1:c.1987G>A NP_001308943.1:p.Glu663Lys
NM_001322015.1:c.1678G>A NP_001308944.1:p.Glu560Lys
NR_136154.1:n.2074G>A
XM_006715744.4:c.1054G>A XP_006715807.1:p.Glu352Lys
XM_017012342.2:c.1054G>A XP_016867831.1:p.Glu352Lys
XM_024446800.1:c.1426G>A XP_024302568.1:p.Glu476Lys
NM_000535.7:c.1987G>A MANE Select NP_000526.2:p.Glu663Lys
NM_001322003.2:c.1582G>A NP_001308932.1:p.Glu528Lys
NM_001322004.2:c.1582G>A NP_001308933.1:p.Glu528Lys
NM_001322005.2:c.1582G>A NP_001308934.1:p.Glu528Lys
NM_001322006.2:c.1831G>A NP_001308935.1:p.Glu611Lys
NM_001322008.2:c.1669G>A NP_001308937.1:p.Glu557Lys
NM_001322009.2:c.1582G>A NP_001308938.1:p.Glu528Lys
NM_001322010.2:c.1426G>A NP_001308939.1:p.Glu476Lys
NM_001322011.2:c.1054G>A NP_001308940.1:p.Glu352Lys
NM_001322012.2:c.1054G>A NP_001308941.1:p.Glu352Lys
NM_001322013.2:c.1414G>A NP_001308942.1:p.Glu472Lys
NM_001322014.2:c.1987G>A NP_001308943.1:p.Glu663Lys
NM_001322015.2:c.1678G>A NP_001308944.1:p.Glu560Lys
NM_001322007.2:c.1669G>A NP_001308936.1:p.Glu557Lys