Canonical Allele Identifier: CA366738011
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 1683853
ClinVar RCV Id: RCV002244375
dbSNP Id: rs1085308060
gnomAD v4: 7-5982905-A-G

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5982905A>G , CM000669.2:g.5982905A>G GRCh38
NC_000007.13:g.6022536A>G , CM000669.1:g.6022536A>G GRCh37
NC_000007.12:g.5989062A>G NCBI36
NG_008466.1:g.31202T>C , LRG_161:g.31202T>C

Transcript Alleles

HGVS Amino-acid change
ENST00000699814.2:c.*1489T>C ENSP00000514615.2:n.*1489T>C
ENST00000699840.2:c.2090T>C ENSP00000514638.2:p.Val697Ala
ENST00000699930.2:c.1985T>C ENSP00000514695.2:p.Val662Ala
ENST00000406569.8:c.1678+4182T>C ENSP00000514464.1:n.1678+4182T>C
ENST00000644110.2:c.*1687T>C ENSP00000496392.2:n.*1687T>C
ENST00000699752.1:c.1937T>C ENSP00000514561.1:p.Val646Ala
ENST00000699753.1:c.*1514T>C ENSP00000514562.1:n.*1514T>C
ENST00000699754.1:c.1895T>C ENSP00000514563.1:p.Val632Ala
ENST00000699755.1:c.*1492T>C ENSP00000514564.1:n.*1492T>C
ENST00000699756.1:c.*1680T>C ENSP00000514565.1:n.*1680T>C
ENST00000699757.1:c.*1350T>C ENSP00000514566.1:n.*1350T>C
ENST00000699758.1:c.*1350T>C ENSP00000514567.1:n.*1350T>C
ENST00000699759.1:n.2947T>C
ENST00000699760.1:c.1775T>C ENSP00000514568.1:p.Val592Ala
ENST00000699761.1:c.1688T>C ENSP00000514569.1:p.Val563Ala
ENST00000699762.1:c.1520T>C ENSP00000514570.1:p.Val507Ala
ENST00000699763.1:c.*1183T>C ENSP00000514571.1:n.*1183T>C
ENST00000699764.1:c.*411T>C ENSP00000514572.1:n.*411T>C
ENST00000699765.1:c.*1189T>C ENSP00000514573.1:n.*1189T>C
ENST00000699766.1:c.2093T>C ENSP00000514574.1:p.Val698Ala
ENST00000699767.1:c.2093T>C ENSP00000514575.1:p.Val698Ala
ENST00000699768.1:c.2093T>C ENSP00000514576.1:p.Val698Ala
ENST00000699811.1:c.1688T>C ENSP00000514614.1:p.Val563Ala
ENST00000699813.1:n.2206T>C
ENST00000699814.1:c.1716T>C
ENST00000699815.1:c.*1624T>C ENSP00000514616.1:n.*1624T>C
ENST00000699816.1:c.*983T>C ENSP00000514617.1:n.*983T>C
ENST00000699817.1:c.*1687T>C ENSP00000514618.1:n.*1687T>C
ENST00000699818.1:c.1688T>C ENSP00000514619.1:p.Val563Ala
ENST00000699819.1:c.*1250T>C ENSP00000514620.1:n.*1250T>C
ENST00000699820.1:c.*31T>C ENSP00000514621.1:n.*31T>C
ENST00000699821.1:c.1688T>C ENSP00000514622.1:p.Val563Ala
ENST00000699822.1:c.*1545T>C ENSP00000514623.1:n.*1545T>C
ENST00000699823.1:c.1688T>C ENSP00000514624.1:p.Val563Ala
ENST00000699824.1:c.*1596T>C ENSP00000514625.1:n.*1596T>C
ENST00000699825.1:c.1532T>C ENSP00000514626.1:p.Val511Ala
ENST00000699826.1:c.*1492T>C ENSP00000514627.1:n.*1492T>C
ENST00000699827.1:c.1925T>C ENSP00000514628.1:p.Val642Ala
ENST00000699828.1:c.*1183T>C ENSP00000514629.1:n.*1183T>C
ENST00000699833.1:n.3865T>C
ENST00000699837.1:c.1688T>C ENSP00000514635.1:p.Val563Ala
ENST00000699838.1:c.*1993T>C ENSP00000514636.1:n.*1993T>C
ENST00000699839.1:c.2279T>C ENSP00000514637.1:p.Val760Ala
ENST00000699916.1:c.*1350T>C ENSP00000514684.1:n.*1350T>C
ENST00000699917.1:c.*1542T>C ENSP00000514685.1:n.*1542T>C
ENST00000699918.1:c.*1594T>C ENSP00000514686.1:n.*1594T>C
ENST00000699919.1:c.*1680T>C ENSP00000514687.1:n.*1680T>C
ENST00000699920.1:c.*1729T>C ENSP00000514688.1:n.*1729T>C
ENST00000699928.1:c.*31T>C ENSP00000514693.1:n.*31T>C
ENST00000699951.1:c.*1189T>C ENSP00000514706.1:n.*1189T>C
ENST00000699952.1:c.804-9363T>C ENSP00000514707.1:n.804-9363T>C
ENST00000265849.12:c.2093T>C MANE Select ENSP00000265849.7:p.Val698Ala
ENST00000642292.1:c.1688T>C ENSP00000495524.1:p.Val563Ala
ENST00000642456.1:c.1688T>C ENSP00000493814.1:p.Val563Ala
ENST00000643595.1:c.*1492T>C ENSP00000494497.1:n.*1492T>C
ENST00000644110.1:c.1775T>C ENSP00000496392.1:p.Val592Ala
ENST00000265849.11:c.2093T>C ENSP00000265849.7:p.Val698Ala
ENST00000382321.5:c.890T>C ENSP00000371758.4:p.Val297Ala
ENST00000406569.7:n.1678+4182T>C
ENST00000441476.6:c.1775T>C ENSP00000392843.2:p.Val592Ala
ENST00000469652.1:n.63T>C
NM_000535.5:c.2093T>C , LRG_161t1:c.2093T>C NP_000526.1:p.Val698Ala
NR_003085.2:n.2175T>C
XM_006715742.2:c.2087T>C XP_006715805.1:p.Val696Ala
XM_006715744.2:c.1160T>C XP_006715807.1:p.Val387Ala
XM_011515427.1:c.2138T>C XP_011513729.1:p.Val713Ala
XM_011515428.1:c.1982T>C XP_011513730.1:p.Val661Ala
XM_011515429.1:c.1775T>C XP_011513731.1:p.Val592Ala
XM_011515430.1:c.1775T>C XP_011513732.1:p.Val592Ala
NM_000535.6:c.2093T>C NP_000526.2:p.Val698Ala
NM_001322003.1:c.1688T>C NP_001308932.1:p.Val563Ala
NM_001322004.1:c.1688T>C NP_001308933.1:p.Val563Ala
NM_001322005.1:c.1688T>C NP_001308934.1:p.Val563Ala
NM_001322006.1:c.1937T>C NP_001308935.1:p.Val646Ala
NM_001322007.1:c.1775T>C NP_001308936.1:p.Val592Ala
NM_001322008.1:c.1775T>C NP_001308937.1:p.Val592Ala
NM_001322009.1:c.1688T>C NP_001308938.1:p.Val563Ala
NM_001322010.1:c.1532T>C NP_001308939.1:p.Val511Ala
NM_001322011.1:c.1160T>C NP_001308940.1:p.Val387Ala
NM_001322012.1:c.1160T>C NP_001308941.1:p.Val387Ala
NM_001322013.1:c.1520T>C NP_001308942.1:p.Val507Ala
NM_001322014.1:c.2093T>C NP_001308943.1:p.Val698Ala
NM_001322015.1:c.1784T>C NP_001308944.1:p.Val595Ala
NR_136154.1:n.2180T>C
XM_006715744.4:c.1160T>C XP_006715807.1:p.Val387Ala
XM_017012342.2:c.1160T>C XP_016867831.1:p.Val387Ala
XM_024446800.1:c.1532T>C XP_024302568.1:p.Val511Ala
NM_000535.7:c.2093T>C MANE Select NP_000526.2:p.Val698Ala
NM_001322003.2:c.1688T>C NP_001308932.1:p.Val563Ala
NM_001322004.2:c.1688T>C NP_001308933.1:p.Val563Ala
NM_001322005.2:c.1688T>C NP_001308934.1:p.Val563Ala
NM_001322006.2:c.1937T>C NP_001308935.1:p.Val646Ala
NM_001322008.2:c.1775T>C NP_001308937.1:p.Val592Ala
NM_001322009.2:c.1688T>C NP_001308938.1:p.Val563Ala
NM_001322010.2:c.1532T>C NP_001308939.1:p.Val511Ala
NM_001322011.2:c.1160T>C NP_001308940.1:p.Val387Ala
NM_001322012.2:c.1160T>C NP_001308941.1:p.Val387Ala
NM_001322013.2:c.1520T>C NP_001308942.1:p.Val507Ala
NM_001322014.2:c.2093T>C NP_001308943.1:p.Val698Ala
NM_001322015.2:c.1784T>C NP_001308944.1:p.Val595Ala
NM_001322007.2:c.1775T>C NP_001308936.1:p.Val592Ala