Canonical Allele Identifier: CA366735750

Gene: PMS2

Linked Data

• ClinVar Variation Id: 480357
• ClinVar RCV Id: RCV000565385 ; RCV003329309 ; RCV001050929
• dbSNP Id: rs1423733655
• gnomAD v2: 7-6017281-C-T
• gnomAD v3: 7-5977650-C-T
• gnomAD v4: 7-5977650-C-T
• MyVariant Identifiers: chr7:g.6017281C>T (hg19) ; chr7:g.5977650C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5977650C>T , CM000669.2:g.5977650C>T	GRCh38
NC_000007.13:g.6017281C>T , CM000669.1:g.6017281C>T	GRCh37
NC_000007.12:g.5983807C>T	NCBI36
NG_008466.1:g.36457G>A , LRG_161:g.36457G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000699814.2:c.*1779G>A	ENSP00000514615.2:n.*1779G>A
ENST00000699840.2:c.2380G>A	ENSP00000514638.2:p.Gly794Arg
ENST00000699930.2:c.2275G>A	ENSP00000514695.2:p.Gly759Arg
ENST00000406569.8:c.1743G>A	ENSP00000514464.1:n.1743G>A
ENST00000644110.2:c.*1977G>A	ENSP00000496392.2:n.*1977G>A
ENST00000699752.1:c.2227G>A	ENSP00000514561.1:p.Gly743Arg
ENST00000699753.1:c.*1804G>A	ENSP00000514562.1:n.*1804G>A
ENST00000699754.1:c.2185G>A	ENSP00000514563.1:p.Gly729Arg
ENST00000699755.1:c.*1782G>A	ENSP00000514564.1:n.*1782G>A
ENST00000699756.1:c.*1970G>A	ENSP00000514565.1:n.*1970G>A
ENST00000699757.1:c.*1640G>A	ENSP00000514566.1:n.*1640G>A
ENST00000699758.1:c.*1640G>A	ENSP00000514567.1:n.*1640G>A
ENST00000699759.1:n.3237G>A
ENST00000699760.1:c.2065G>A	ENSP00000514568.1:p.Gly689Arg
ENST00000699761.1:c.1978G>A	ENSP00000514569.1:p.Gly660Arg
ENST00000699762.1:c.1810G>A	ENSP00000514570.1:p.Gly604Arg
ENST00000699763.1:c.*1473G>A	ENSP00000514571.1:n.*1473G>A
ENST00000699764.1:c.*701G>A	ENSP00000514572.1:n.*701G>A
ENST00000699765.1:c.*1378G>A	ENSP00000514573.1:n.*1378G>A
ENST00000699766.1:c.2416G>A	ENSP00000514574.1:p.Gly806Arg
ENST00000699767.1:c.*24G>A	ENSP00000514575.1:n.*24G>A
ENST00000699768.1:c.2239G>A	ENSP00000514576.1:p.Gly747Arg
ENST00000699811.1:c.1978G>A	ENSP00000514614.1:p.Gly660Arg
ENST00000699813.1:n.2496G>A
ENST00000699814.1:c.2006G>A
ENST00000699815.1:c.*1914G>A	ENSP00000514616.1:n.*1914G>A
ENST00000699816.1:c.*1273G>A	ENSP00000514617.1:n.*1273G>A
ENST00000699817.1:c.*1977G>A	ENSP00000514618.1:n.*1977G>A
ENST00000699818.1:c.1978G>A	ENSP00000514619.1:p.Gly660Arg
ENST00000699819.1:c.*1540G>A	ENSP00000514620.1:n.*1540G>A
ENST00000699820.1:c.*321G>A	ENSP00000514621.1:n.*321G>A
ENST00000699821.1:c.2011G>A	ENSP00000514622.1:p.Gly671Arg
ENST00000699822.1:c.*1835G>A	ENSP00000514623.1:n.*1835G>A
ENST00000699823.1:c.1978G>A	ENSP00000514624.1:p.Gly660Arg
ENST00000699824.1:c.*1886G>A	ENSP00000514625.1:n.*1886G>A
ENST00000699825.1:c.1822G>A	ENSP00000514626.1:p.Gly608Arg
ENST00000699826.1:c.*1782G>A	ENSP00000514627.1:n.*1782G>A
ENST00000699827.1:c.2215G>A	ENSP00000514628.1:p.Gly739Arg
ENST00000699828.1:c.*1473G>A	ENSP00000514629.1:n.*1473G>A
ENST00000699833.1:n.4155G>A
ENST00000699837.1:c.1978G>A	ENSP00000514635.1:p.Gly660Arg
ENST00000699838.1:c.*2283G>A	ENSP00000514636.1:n.*2283G>A
ENST00000699839.1:c.2569G>A	ENSP00000514637.1:p.Gly857Arg
ENST00000699916.1:c.*1640G>A	ENSP00000514684.1:n.*1640G>A
ENST00000699917.1:c.*1832G>A	ENSP00000514685.1:n.*1832G>A
ENST00000699918.1:c.*1884G>A	ENSP00000514686.1:n.*1884G>A
ENST00000699919.1:c.*1970G>A	ENSP00000514687.1:n.*1970G>A
ENST00000699920.1:c.*2019G>A	ENSP00000514688.1:n.*2019G>A
ENST00000699928.1:c.*321G>A	ENSP00000514693.1:n.*321G>A
ENST00000699951.1:c.*1436G>A	ENSP00000514706.1:n.*1436G>A
ENST00000699952.1:c.804-4108G>A	ENSP00000514707.1:n.804-4108G>A
ENST00000265849.12:c.2383G>A MANE Select	ENSP00000265849.7:p.Gly795Arg
ENST00000642292.1:c.1978G>A	ENSP00000495524.1:p.Gly660Arg
ENST00000642456.1:c.1978G>A	ENSP00000493814.1:p.Gly660Arg
ENST00000643595.1:c.*1782G>A	ENSP00000494497.1:n.*1782G>A
ENST00000644110.1:c.2065G>A	ENSP00000496392.1:p.Gly689Arg
ENST00000265849.11:c.2383G>A	ENSP00000265849.7:p.Gly795Arg
ENST00000382321.5:c.1180G>A	ENSP00000371758.4:p.Gly394Arg
ENST00000441476.6:c.2065G>A	ENSP00000392843.2:p.Gly689Arg
NM_000535.5:c.2383G>A , LRG_161t1:c.2383G>A	NP_000526.1:p.Gly795Arg
NR_003085.2:n.2465G>A
XM_006715742.2:c.2377G>A	XP_006715805.1:p.Gly793Arg
XM_006715744.2:c.1450G>A	XP_006715807.1:p.Gly484Arg
XM_011515427.1:c.2428G>A	XP_011513729.1:p.Gly810Arg
XM_011515428.1:c.2272G>A	XP_011513730.1:p.Gly758Arg
XM_011515429.1:c.2065G>A	XP_011513731.1:p.Gly689Arg
XM_011515430.1:c.2065G>A	XP_011513732.1:p.Gly689Arg
NM_000535.6:c.2383G>A	NP_000526.2:p.Gly795Arg
NM_001322003.1:c.1978G>A	NP_001308932.1:p.Gly660Arg
NM_001322004.1:c.1978G>A	NP_001308933.1:p.Gly660Arg
NM_001322005.1:c.1978G>A	NP_001308934.1:p.Gly660Arg
NM_001322006.1:c.2227G>A	NP_001308935.1:p.Gly743Arg
NM_001322007.1:c.2065G>A	NP_001308936.1:p.Gly689Arg
NM_001322008.1:c.2065G>A	NP_001308937.1:p.Gly689Arg
NM_001322009.1:c.2011G>A	NP_001308938.1:p.Gly671Arg
NM_001322010.1:c.1822G>A	NP_001308939.1:p.Gly608Arg
NM_001322011.1:c.1450G>A	NP_001308940.1:p.Gly484Arg
NM_001322012.1:c.1450G>A	NP_001308941.1:p.Gly484Arg
NM_001322013.1:c.1810G>A	NP_001308942.1:p.Gly604Arg
NM_001322014.1:c.2416G>A	NP_001308943.1:p.Gly806Arg
NM_001322015.1:c.2074G>A	NP_001308944.1:p.Gly692Arg
NR_136154.1:n.2427G>A
XM_006715744.4:c.1450G>A	XP_006715807.1:p.Gly484Arg
XM_017012342.2:c.1450G>A	XP_016867831.1:p.Gly484Arg
XM_024446800.1:c.1822G>A	XP_024302568.1:p.Gly608Arg
NM_000535.7:c.2383G>A MANE Select	NP_000526.2:p.Gly795Arg
NM_001322003.2:c.1978G>A	NP_001308932.1:p.Gly660Arg
NM_001322004.2:c.1978G>A	NP_001308933.1:p.Gly660Arg
NM_001322005.2:c.1978G>A	NP_001308934.1:p.Gly660Arg
NM_001322006.2:c.2227G>A	NP_001308935.1:p.Gly743Arg
NM_001322008.2:c.2065G>A	NP_001308937.1:p.Gly689Arg
NM_001322009.2:c.2011G>A	NP_001308938.1:p.Gly671Arg
NM_001322010.2:c.1822G>A	NP_001308939.1:p.Gly608Arg
NM_001322011.2:c.1450G>A	NP_001308940.1:p.Gly484Arg
NM_001322012.2:c.1450G>A	NP_001308941.1:p.Gly484Arg
NM_001322013.2:c.1810G>A	NP_001308942.1:p.Gly604Arg
NM_001322014.2:c.2416G>A	NP_001308943.1:p.Gly806Arg
NM_001322015.2:c.2074G>A	NP_001308944.1:p.Gly692Arg
NM_001322007.2:c.2065G>A	NP_001308936.1:p.Gly689Arg