Canonical Allele Identifier: CA366734818

Gene: PMS2

Linked Data

• ClinVar Variation Id: 1027171
• ClinVar RCV Id: RCV001327730 ; RCV002431938 ; RCV003449942
• dbSNP Id: rs1781486223
• gnomAD v4: 7-5973439-A-C
• MyVariant Identifiers: chr7:g.6013070A>C (hg19) ; chr7:g.5973439A>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5973439A>C , CM000669.2:g.5973439A>C	GRCh38
NC_000007.13:g.6013070A>C , CM000669.1:g.6013070A>C	GRCh37
NC_000007.12:g.5979596A>C	NCBI36
NG_008466.1:g.40668T>G , LRG_161:g.40668T>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000699814.2:c.*1945T>G	ENSP00000514615.2:n.*1945T>G
ENST00000699840.2:c.2546T>G	ENSP00000514638.2:p.Met849Arg
ENST00000699930.2:c.2441T>G	ENSP00000514695.2:p.Met814Arg
ENST00000406569.8:c.1909T>G	ENSP00000514464.1:n.1909T>G
ENST00000644110.2:c.*2143T>G	ENSP00000496392.2:n.*2143T>G
ENST00000699752.1:c.2393T>G	ENSP00000514561.1:p.Met798Arg
ENST00000699753.1:c.*1970T>G	ENSP00000514562.1:n.*1970T>G
ENST00000699754.1:c.2351T>G	ENSP00000514563.1:p.Met784Arg
ENST00000699755.1:c.*1948T>G	ENSP00000514564.1:n.*1948T>G
ENST00000699756.1:c.*2136T>G	ENSP00000514565.1:n.*2136T>G
ENST00000699757.1:c.*1806T>G	ENSP00000514566.1:n.*1806T>G
ENST00000699758.1:c.*1806T>G	ENSP00000514567.1:n.*1806T>G
ENST00000699759.1:n.3403T>G
ENST00000699760.1:c.2231T>G	ENSP00000514568.1:p.Met744Arg
ENST00000699761.1:c.2144T>G	ENSP00000514569.1:p.Met715Arg
ENST00000699762.1:c.1976T>G	ENSP00000514570.1:p.Met659Arg
ENST00000699763.1:c.*1639T>G	ENSP00000514571.1:n.*1639T>G
ENST00000699764.1:c.*867T>G	ENSP00000514572.1:n.*867T>G
ENST00000699765.1:c.*1544T>G	ENSP00000514573.1:n.*1544T>G
ENST00000699766.1:c.2582T>G	ENSP00000514574.1:p.Met861Arg
ENST00000699767.1:c.*190T>G	ENSP00000514575.1:n.*190T>G
ENST00000699768.1:c.2405T>G	ENSP00000514576.1:p.Met802Arg
ENST00000699811.1:c.2144T>G	ENSP00000514614.1:p.Met715Arg
ENST00000699813.1:n.2662T>G
ENST00000699814.1:c.2172T>G
ENST00000699815.1:c.*2080T>G	ENSP00000514616.1:n.*2080T>G
ENST00000699816.1:c.*1439T>G	ENSP00000514617.1:n.*1439T>G
ENST00000699817.1:c.*2143T>G	ENSP00000514618.1:n.*2143T>G
ENST00000699818.1:c.2144T>G	ENSP00000514619.1:p.Met715Arg
ENST00000699819.1:c.*1706T>G	ENSP00000514620.1:n.*1706T>G
ENST00000699820.1:c.*487T>G	ENSP00000514621.1:n.*487T>G
ENST00000699821.1:c.2177T>G	ENSP00000514622.1:p.Met726Arg
ENST00000699822.1:c.*2001T>G	ENSP00000514623.1:n.*2001T>G
ENST00000699823.1:c.2144T>G	ENSP00000514624.1:p.Met715Arg
ENST00000699824.1:c.*2052T>G	ENSP00000514625.1:n.*2052T>G
ENST00000699825.1:c.1988T>G	ENSP00000514626.1:p.Met663Arg
ENST00000699826.1:c.*1948T>G	ENSP00000514627.1:n.*1948T>G
ENST00000699827.1:c.2381T>G	ENSP00000514628.1:p.Met794Arg
ENST00000699828.1:c.*1639T>G	ENSP00000514629.1:n.*1639T>G
ENST00000699833.1:n.4321T>G
ENST00000699837.1:c.2144T>G	ENSP00000514635.1:p.Met715Arg
ENST00000699838.1:c.*2449T>G	ENSP00000514636.1:n.*2449T>G
ENST00000699839.1:c.2735T>G	ENSP00000514637.1:p.Met912Arg
ENST00000699916.1:c.*1806T>G	ENSP00000514684.1:n.*1806T>G
ENST00000699917.1:c.*1998T>G	ENSP00000514685.1:n.*1998T>G
ENST00000699918.1:c.*2050T>G	ENSP00000514686.1:n.*2050T>G
ENST00000699919.1:c.*2136T>G	ENSP00000514687.1:n.*2136T>G
ENST00000699920.1:c.*2185T>G	ENSP00000514688.1:n.*2185T>G
ENST00000699928.1:c.*487T>G	ENSP00000514693.1:n.*487T>G
ENST00000699951.1:c.*1602T>G	ENSP00000514706.1:n.*1602T>G
ENST00000699952.1:c.*103T>G	ENSP00000514707.1:n.*103T>G
ENST00000265849.12:c.2549T>G MANE Select	ENSP00000265849.7:p.Met850Arg
ENST00000642292.1:c.2144T>G	ENSP00000495524.1:p.Met715Arg
ENST00000642456.1:c.2144T>G	ENSP00000493814.1:p.Met715Arg
ENST00000643595.1:c.*1948T>G	ENSP00000494497.1:n.*1948T>G
ENST00000644110.1:c.2231T>G	ENSP00000496392.1:p.Met744Arg
ENST00000265849.11:c.2549T>G	ENSP00000265849.7:p.Met850Arg
ENST00000382321.5:c.1346T>G	ENSP00000371758.4:p.Met449Arg
ENST00000441476.6:c.2231T>G	ENSP00000392843.2:p.Met744Arg
NM_000535.5:c.2549T>G , LRG_161t1:c.2549T>G	NP_000526.1:p.Met850Arg
NR_003085.2:n.2631T>G
XM_006715742.2:c.2543T>G	XP_006715805.1:p.Met848Arg
XM_006715744.2:c.1616T>G	XP_006715807.1:p.Met539Arg
XM_011515427.1:c.2594T>G	XP_011513729.1:p.Met865Arg
XM_011515428.1:c.2438T>G	XP_011513730.1:p.Met813Arg
XM_011515429.1:c.2231T>G	XP_011513731.1:p.Met744Arg
XM_011515430.1:c.2231T>G	XP_011513732.1:p.Met744Arg
NM_000535.6:c.2549T>G	NP_000526.2:p.Met850Arg
NM_001322003.1:c.2144T>G	NP_001308932.1:p.Met715Arg
NM_001322004.1:c.2144T>G	NP_001308933.1:p.Met715Arg
NM_001322005.1:c.2144T>G	NP_001308934.1:p.Met715Arg
NM_001322006.1:c.2393T>G	NP_001308935.1:p.Met798Arg
NM_001322007.1:c.2231T>G	NP_001308936.1:p.Met744Arg
NM_001322008.1:c.2231T>G	NP_001308937.1:p.Met744Arg
NM_001322009.1:c.2177T>G	NP_001308938.1:p.Met726Arg
NM_001322010.1:c.1988T>G	NP_001308939.1:p.Met663Arg
NM_001322011.1:c.1616T>G	NP_001308940.1:p.Met539Arg
NM_001322012.1:c.1616T>G	NP_001308941.1:p.Met539Arg
NM_001322013.1:c.1976T>G	NP_001308942.1:p.Met659Arg
NM_001322014.1:c.2582T>G	NP_001308943.1:p.Met861Arg
NM_001322015.1:c.2240T>G	NP_001308944.1:p.Met747Arg
NR_136154.1:n.2593T>G
XM_006715744.4:c.1616T>G	XP_006715807.1:p.Met539Arg
XM_017012342.2:c.1616T>G	XP_016867831.1:p.Met539Arg
XM_024446800.1:c.1988T>G	XP_024302568.1:p.Met663Arg
NM_000535.7:c.2549T>G MANE Select	NP_000526.2:p.Met850Arg
NM_001322003.2:c.2144T>G	NP_001308932.1:p.Met715Arg
NM_001322004.2:c.2144T>G	NP_001308933.1:p.Met715Arg
NM_001322005.2:c.2144T>G	NP_001308934.1:p.Met715Arg
NM_001322006.2:c.2393T>G	NP_001308935.1:p.Met798Arg
NM_001322008.2:c.2231T>G	NP_001308937.1:p.Met744Arg
NM_001322009.2:c.2177T>G	NP_001308938.1:p.Met726Arg
NM_001322010.2:c.1988T>G	NP_001308939.1:p.Met663Arg
NM_001322011.2:c.1616T>G	NP_001308940.1:p.Met539Arg
NM_001322012.2:c.1616T>G	NP_001308941.1:p.Met539Arg
NM_001322013.2:c.1976T>G	NP_001308942.1:p.Met659Arg
NM_001322014.2:c.2582T>G	NP_001308943.1:p.Met861Arg
NM_001322015.2:c.2240T>G	NP_001308944.1:p.Met747Arg
NM_001322007.2:c.2231T>G	NP_001308936.1:p.Met744Arg