Canonical Allele Identifier: CA366734800

Gene: PMS2

Linked Data

• ClinVar Variation Id: 1041782
• ClinVar RCV Id: RCV001345637
• dbSNP Id: rs1583269042
• gnomAD v4: 7-5973432-G-T
• MyVariant Identifiers: chr7:g.6013063G>T (hg19) ; chr7:g.5973432G>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000007.14:g.5973432G>T , CM000669.2:g.5973432G>T	GRCh38
NC_000007.13:g.6013063G>T , CM000669.1:g.6013063G>T	GRCh37
NC_000007.12:g.5979589G>T	NCBI36
NG_008466.1:g.40675C>A , LRG_161:g.40675C>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000699814.2:c.*1952C>A	ENSP00000514615.2:n.*1952C>A
ENST00000699840.2:c.2553C>A	ENSP00000514638.2:p.His851Gln
ENST00000699930.2:c.2448C>A	ENSP00000514695.2:p.His816Gln
ENST00000406569.8:c.1916C>A	ENSP00000514464.1:n.1916C>A
ENST00000644110.2:c.*2150C>A	ENSP00000496392.2:n.*2150C>A
ENST00000699752.1:c.2400C>A	ENSP00000514561.1:p.His800Gln
ENST00000699753.1:c.*1977C>A	ENSP00000514562.1:n.*1977C>A
ENST00000699754.1:c.2358C>A	ENSP00000514563.1:p.His786Gln
ENST00000699755.1:c.*1955C>A	ENSP00000514564.1:n.*1955C>A
ENST00000699756.1:c.*2143C>A	ENSP00000514565.1:n.*2143C>A
ENST00000699757.1:c.*1813C>A	ENSP00000514566.1:n.*1813C>A
ENST00000699758.1:c.*1813C>A	ENSP00000514567.1:n.*1813C>A
ENST00000699759.1:n.3410C>A
ENST00000699760.1:c.2238C>A	ENSP00000514568.1:p.His746Gln
ENST00000699761.1:c.2151C>A	ENSP00000514569.1:p.His717Gln
ENST00000699762.1:c.1983C>A	ENSP00000514570.1:p.His661Gln
ENST00000699763.1:c.*1646C>A	ENSP00000514571.1:n.*1646C>A
ENST00000699764.1:c.*874C>A	ENSP00000514572.1:n.*874C>A
ENST00000699765.1:c.*1551C>A	ENSP00000514573.1:n.*1551C>A
ENST00000699766.1:c.2589C>A	ENSP00000514574.1:p.His863Gln
ENST00000699767.1:c.*197C>A	ENSP00000514575.1:n.*197C>A
ENST00000699768.1:c.2412C>A	ENSP00000514576.1:p.His804Gln
ENST00000699811.1:c.2151C>A	ENSP00000514614.1:p.His717Gln
ENST00000699813.1:n.2669C>A
ENST00000699814.1:c.2179C>A
ENST00000699815.1:c.*2087C>A	ENSP00000514616.1:n.*2087C>A
ENST00000699816.1:c.*1446C>A	ENSP00000514617.1:n.*1446C>A
ENST00000699817.1:c.*2150C>A	ENSP00000514618.1:n.*2150C>A
ENST00000699818.1:c.2151C>A	ENSP00000514619.1:p.His717Gln
ENST00000699819.1:c.*1713C>A	ENSP00000514620.1:n.*1713C>A
ENST00000699820.1:c.*494C>A	ENSP00000514621.1:n.*494C>A
ENST00000699821.1:c.2184C>A	ENSP00000514622.1:p.His728Gln
ENST00000699822.1:c.*2008C>A	ENSP00000514623.1:n.*2008C>A
ENST00000699823.1:c.2151C>A	ENSP00000514624.1:p.His717Gln
ENST00000699824.1:c.*2059C>A	ENSP00000514625.1:n.*2059C>A
ENST00000699825.1:c.1995C>A	ENSP00000514626.1:p.His665Gln
ENST00000699826.1:c.*1955C>A	ENSP00000514627.1:n.*1955C>A
ENST00000699827.1:c.2388C>A	ENSP00000514628.1:p.His796Gln
ENST00000699828.1:c.*1646C>A	ENSP00000514629.1:n.*1646C>A
ENST00000699833.1:n.4328C>A
ENST00000699837.1:c.2151C>A	ENSP00000514635.1:p.His717Gln
ENST00000699838.1:c.*2456C>A	ENSP00000514636.1:n.*2456C>A
ENST00000699839.1:c.2742C>A	ENSP00000514637.1:p.His914Gln
ENST00000699916.1:c.*1813C>A	ENSP00000514684.1:n.*1813C>A
ENST00000699917.1:c.*2005C>A	ENSP00000514685.1:n.*2005C>A
ENST00000699918.1:c.*2057C>A	ENSP00000514686.1:n.*2057C>A
ENST00000699919.1:c.*2143C>A	ENSP00000514687.1:n.*2143C>A
ENST00000699920.1:c.*2192C>A	ENSP00000514688.1:n.*2192C>A
ENST00000699928.1:c.*494C>A	ENSP00000514693.1:n.*494C>A
ENST00000699951.1:c.*1609C>A	ENSP00000514706.1:n.*1609C>A
ENST00000699952.1:c.*110C>A	ENSP00000514707.1:n.*110C>A
ENST00000265849.12:c.2556C>A MANE Select	ENSP00000265849.7:p.His852Gln
ENST00000642292.1:c.2151C>A	ENSP00000495524.1:p.His717Gln
ENST00000642456.1:c.2151C>A	ENSP00000493814.1:p.His717Gln
ENST00000643595.1:c.*1955C>A	ENSP00000494497.1:n.*1955C>A
ENST00000644110.1:c.2238C>A	ENSP00000496392.1:p.His746Gln
ENST00000265849.11:c.2556C>A	ENSP00000265849.7:p.His852Gln
ENST00000382321.5:c.1353C>A	ENSP00000371758.4:p.His451Gln
ENST00000441476.6:c.2238C>A	ENSP00000392843.2:p.His746Gln
NM_000535.5:c.2556C>A , LRG_161t1:c.2556C>A	NP_000526.1:p.His852Gln
NR_003085.2:n.2638C>A
XM_006715742.2:c.2550C>A	XP_006715805.1:p.His850Gln
XM_006715744.2:c.1623C>A	XP_006715807.1:p.His541Gln
XM_011515427.1:c.2601C>A	XP_011513729.1:p.His867Gln
XM_011515428.1:c.2445C>A	XP_011513730.1:p.His815Gln
XM_011515429.1:c.2238C>A	XP_011513731.1:p.His746Gln
XM_011515430.1:c.2238C>A	XP_011513732.1:p.His746Gln
NM_000535.6:c.2556C>A	NP_000526.2:p.His852Gln
NM_001322003.1:c.2151C>A	NP_001308932.1:p.His717Gln
NM_001322004.1:c.2151C>A	NP_001308933.1:p.His717Gln
NM_001322005.1:c.2151C>A	NP_001308934.1:p.His717Gln
NM_001322006.1:c.2400C>A	NP_001308935.1:p.His800Gln
NM_001322007.1:c.2238C>A	NP_001308936.1:p.His746Gln
NM_001322008.1:c.2238C>A	NP_001308937.1:p.His746Gln
NM_001322009.1:c.2184C>A	NP_001308938.1:p.His728Gln
NM_001322010.1:c.1995C>A	NP_001308939.1:p.His665Gln
NM_001322011.1:c.1623C>A	NP_001308940.1:p.His541Gln
NM_001322012.1:c.1623C>A	NP_001308941.1:p.His541Gln
NM_001322013.1:c.1983C>A	NP_001308942.1:p.His661Gln
NM_001322014.1:c.2589C>A	NP_001308943.1:p.His863Gln
NM_001322015.1:c.2247C>A	NP_001308944.1:p.His749Gln
NR_136154.1:n.2600C>A
XM_006715744.4:c.1623C>A	XP_006715807.1:p.His541Gln
XM_017012342.2:c.1623C>A	XP_016867831.1:p.His541Gln
XM_024446800.1:c.1995C>A	XP_024302568.1:p.His665Gln
NM_000535.7:c.2556C>A MANE Select	NP_000526.2:p.His852Gln
NM_001322003.2:c.2151C>A	NP_001308932.1:p.His717Gln
NM_001322004.2:c.2151C>A	NP_001308933.1:p.His717Gln
NM_001322005.2:c.2151C>A	NP_001308934.1:p.His717Gln
NM_001322006.2:c.2400C>A	NP_001308935.1:p.His800Gln
NM_001322008.2:c.2238C>A	NP_001308937.1:p.His746Gln
NM_001322009.2:c.2184C>A	NP_001308938.1:p.His728Gln
NM_001322010.2:c.1995C>A	NP_001308939.1:p.His665Gln
NM_001322011.2:c.1623C>A	NP_001308940.1:p.His541Gln
NM_001322012.2:c.1623C>A	NP_001308941.1:p.His541Gln
NM_001322013.2:c.1983C>A	NP_001308942.1:p.His661Gln
NM_001322014.2:c.2589C>A	NP_001308943.1:p.His863Gln
NM_001322015.2:c.2247C>A	NP_001308944.1:p.His749Gln
NM_001322007.2:c.2238C>A	NP_001308936.1:p.His746Gln