Canonical Allele Identifier: CA366088595

Gene: SYNE1 ESR1

Linked Data

• MyVariant Identifiers: chr6:g.152443626A>T (hg19) ; chr6:g.152122491A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000006.12:g.152122491A>T , CM000668.2:g.152122491A>T	GRCh38
NC_000006.11:g.152443626A>T , CM000668.1:g.152443626A>T	GRCh37
NC_000006.10:g.152485319A>T	NCBI36
NG_012855.1:g.519909T>A
NG_008493.2:g.470801A>T
NG_012855.2:g.519909T>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000354674.5:c.2873T>A (SYNE1) MANE Plus Clinical	ENSP00000346701.4:p.Phe958Tyr
ENST00000367255.10:c.26339T>A (SYNE1) MANE Select	ENSP00000356224.5:p.Phe8780Tyr
ENST00000423061.6:c.26195T>A (SYNE1)	ENSP00000396024.1:p.Phe8732Tyr
ENST00000672154.1:c.1682T>A (SYNE1)
ENST00000672169.1:c.2057T>A (SYNE1)
ENST00000673173.1:c.1924T>A (SYNE1)
ENST00000673451.1:c.2189T>A (SYNE1)	ENSP00000500189.1:n.2189T>A
ENST00000341594.9:c.25124T>A (SYNE1)	ENSP00000341887.6:p.Phe8375Tyr
ENST00000347037.9:n.3087T>A (SYNE1)
ENST00000354674.4:c.2873T>A (SYNE1)	ENSP00000346701.4:p.Phe958Tyr
ENST00000367251.7:c.5115T>A (SYNE1)	ENSP00000356220.3:n.5115T>A
ENST00000367255.9:c.26339T>A (SYNE1)	ENSP00000356224.5:p.Phe8780Tyr
ENST00000367256.9:n.10031T>A (SYNE1)
ENST00000367257.8:c.4218T>A (SYNE1)	ENSP00000356226.4:n.4218T>A
ENST00000409694.6:n.9923T>A (SYNE1)
ENST00000423061.5:c.26195T>A (SYNE1)	ENSP00000396024.1:p.Phe8732Tyr
ENST00000427531.6:c.851-2775A>T (ESR1)	ENSP00000394721.2:n.851-2775A>T
ENST00000460912.6:n.2953T>A (SYNE1)
ENST00000478916.5:n.6976T>A (SYNE1)
ENST00000539504.5:c.2804T>A (SYNE1)	ENSP00000441052.1:p.Phe935Tyr
NM_033071.3:c.26195T>A (SYNE1)	NP_149062.1:p.Phe8732Tyr
NM_182961.3:c.26339T>A (SYNE1)	NP_892006.3:p.Phe8780Tyr
XM_006715407.1:c.26486T>A (SYNE1)	XP_006715470.1:p.Phe8829Tyr
XM_006715408.1:c.26474T>A (SYNE1)	XP_006715471.1:p.Phe8825Tyr
XM_006715409.1:c.26465T>A (SYNE1)	XP_006715472.1:p.Phe8822Tyr
XM_006715410.1:c.26444T>A (SYNE1)	XP_006715473.1:p.Phe8815Tyr
XM_006715411.1:c.26435T>A (SYNE1)	XP_006715474.1:p.Phe8812Tyr
XM_006715412.1:c.26429T>A (SYNE1)	XP_006715475.1:p.Phe8810Tyr
XM_006715413.1:c.26417T>A (SYNE1)	XP_006715476.1:p.Phe8806Tyr
XM_006715414.1:c.26414T>A (SYNE1)	XP_006715477.1:p.Phe8805Tyr
XM_006715415.1:c.26375T>A (SYNE1)	XP_006715478.1:p.Phe8792Tyr
XM_006715416.1:c.26360T>A (SYNE1)	XP_006715479.1:p.Phe8787Tyr
XM_006715417.1:c.26345T>A (SYNE1)	XP_006715480.1:p.Phe8782Tyr
XM_006715420.1:c.26333T>A (SYNE1)	XP_006715483.1:p.Phe8778Tyr
XM_006715421.1:c.26330T>A (SYNE1)	XP_006715484.1:p.Phe8777Tyr
XM_006715422.1:c.26327T>A (SYNE1)	XP_006715485.1:p.Phe8776Tyr
XM_006715423.1:c.*150T>A (SYNE1)	XP_006715486.1:n.*150T>A
XM_006715424.1:c.*150T>A (SYNE1)	XP_006715487.1:n.*150T>A
XM_006715425.1:c.*150T>A (SYNE1)	XP_006715488.1:n.*150T>A
XM_011535641.1:c.26483T>A (SYNE1)	XP_011533943.1:p.Phe8828Tyr
XM_011535642.1:c.26471T>A (SYNE1)	XP_011533944.1:p.Phe8824Tyr
XM_011535643.1:c.26321T>A (SYNE1)	XP_011533945.1:p.Phe8774Tyr
XM_011535644.1:c.24761T>A (SYNE1)	XP_011533946.1:p.Phe8254Tyr
XM_011535645.1:c.24254T>A (SYNE1)	XP_011533947.1:p.Phe8085Tyr
XM_011535647.1:c.19721T>A (SYNE1)	XP_011533949.1:p.Phe6574Tyr
NM_001328100.1:c.851-2775A>T (ESR1)	NP_001315029.1:n.851-2775A>T
NM_001347701.1:c.*150T>A (SYNE1)	NP_001334630.1:n.*150T>A
NM_001347702.1:c.2873T>A (SYNE1)	NP_001334631.1:p.Phe958Tyr
XM_006715408.2:c.26474T>A (SYNE1)	XP_006715471.1:p.Phe8825Tyr
XM_006715410.2:c.26444T>A (SYNE1)	XP_006715473.1:p.Phe8815Tyr
XM_006715412.2:c.26429T>A (SYNE1)	XP_006715475.1:p.Phe8810Tyr
XM_006715413.2:c.26417T>A (SYNE1)	XP_006715476.1:p.Phe8806Tyr
XM_006715415.2:c.26375T>A (SYNE1)	XP_006715478.1:p.Phe8792Tyr
XM_006715416.2:c.26360T>A (SYNE1)	XP_006715479.1:p.Phe8787Tyr
XM_006715417.2:c.26345T>A (SYNE1)	XP_006715480.1:p.Phe8782Tyr
XM_006715420.2:c.26333T>A (SYNE1)	XP_006715483.1:p.Phe8778Tyr
XM_006715421.2:c.26330T>A (SYNE1)	XP_006715484.1:p.Phe8777Tyr
XM_006715423.2:c.*150T>A (SYNE1)	XP_006715486.1:n.*150T>A
XM_006715424.2:c.*150T>A (SYNE1)	XP_006715487.1:n.*150T>A
XM_006715425.2:c.*150T>A (SYNE1)	XP_006715488.1:n.*150T>A
XM_011535641.2:c.26483T>A (SYNE1)	XP_011533943.1:p.Phe8828Tyr
XM_011535642.2:c.26471T>A (SYNE1)	XP_011533944.1:p.Phe8824Tyr
XM_011535645.2:c.24254T>A (SYNE1)	XP_011533947.1:p.Phe8085Tyr
XM_017010608.1:c.26486T>A (SYNE1)	XP_016866097.1:p.Phe8829Tyr
XM_017010609.1:c.26486T>A (SYNE1)	XP_016866098.1:p.Phe8829Tyr
XM_017010610.1:c.26465T>A (SYNE1)	XP_016866099.1:p.Phe8822Tyr
XM_017010611.2:c.26459T>A (SYNE1)	XP_016866100.1:p.Phe8820Tyr
XM_017010612.1:c.26408T>A (SYNE1)	XP_016866101.1:p.Phe8803Tyr
XM_017010613.1:c.26372T>A (SYNE1)	XP_016866102.1:p.Phe8791Tyr
XM_017010614.1:c.26330T>A (SYNE1)	XP_016866103.1:p.Phe8777Tyr
XM_017010615.1:c.26219T>A (SYNE1)	XP_016866104.1:p.Phe8740Tyr
XM_017010616.1:c.*150T>A (SYNE1)	XP_016866105.1:n.*150T>A
XM_017010617.1:c.*150T>A (SYNE1)	XP_016866106.1:n.*150T>A
XM_017010618.1:c.*150T>A (SYNE1)	XP_016866107.1:n.*150T>A
XM_017010619.1:c.24761T>A (SYNE1)	XP_016866108.1:p.Phe8254Tyr
NM_182961.4:c.26339T>A (SYNE1) MANE Select	NP_892006.3:p.Phe8780Tyr
NM_001328100.2:c.851-2775A>T (ESR1)	NP_001315029.1:n.851-2775A>T
NM_001347701.2:c.*150T>A (SYNE1)	NP_001334630.1:n.*150T>A
NM_001347702.2:c.2873T>A (SYNE1) MANE Plus Clinical	NP_001334631.1:p.Phe958Tyr
NM_033071.5:c.26195T>A (SYNE1)	NP_149062.2:p.Phe8732Tyr