Canonical Allele Identifier: CA366088523

Gene: SYNE1 ESR1

Linked Data

• MyVariant Identifiers: chr6:g.152443609G>A (hg19) ; chr6:g.152122474G>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000006.12:g.152122474G>A , CM000668.2:g.152122474G>A	GRCh38
NC_000006.11:g.152443609G>A , CM000668.1:g.152443609G>A	GRCh37
NC_000006.10:g.152485302G>A	NCBI36
NG_012855.1:g.519926C>T
NG_008493.2:g.470784G>A
NG_012855.2:g.519926C>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000354674.5:c.2890C>T (SYNE1) MANE Plus Clinical	ENSP00000346701.4:p.Pro964Ser
ENST00000367255.10:c.26356C>T (SYNE1) MANE Select	ENSP00000356224.5:p.Pro8786Ser
ENST00000423061.6:c.26212C>T (SYNE1)	ENSP00000396024.1:p.Pro8738Ser
ENST00000672154.1:c.1699C>T (SYNE1)
ENST00000672169.1:c.2074C>T (SYNE1)
ENST00000673173.1:c.1941C>T (SYNE1)
ENST00000673451.1:c.2206C>T (SYNE1)	ENSP00000500189.1:n.2206C>T
ENST00000341594.9:c.25141C>T (SYNE1)	ENSP00000341887.6:p.Pro8381Ser
ENST00000347037.9:n.3104C>T (SYNE1)
ENST00000354674.4:c.2890C>T (SYNE1)	ENSP00000346701.4:p.Pro964Ser
ENST00000367251.7:c.5132C>T (SYNE1)	ENSP00000356220.3:n.5132C>T
ENST00000367255.9:c.26356C>T (SYNE1)	ENSP00000356224.5:p.Pro8786Ser
ENST00000367256.9:n.10048C>T (SYNE1)
ENST00000367257.8:c.4235C>T (SYNE1)	ENSP00000356226.4:n.4235C>T
ENST00000409694.6:n.9940C>T (SYNE1)
ENST00000423061.5:c.26212C>T (SYNE1)	ENSP00000396024.1:p.Pro8738Ser
ENST00000427531.6:c.851-2792G>A (ESR1)	ENSP00000394721.2:n.851-2792G>A
ENST00000460912.6:n.2970C>T (SYNE1)
ENST00000478916.5:n.6993C>T (SYNE1)
ENST00000539504.5:c.2821C>T (SYNE1)	ENSP00000441052.1:p.Pro941Ser
NM_033071.3:c.26212C>T (SYNE1)	NP_149062.1:p.Pro8738Ser
NM_182961.3:c.26356C>T (SYNE1)	NP_892006.3:p.Pro8786Ser
XM_006715407.1:c.26503C>T (SYNE1)	XP_006715470.1:p.Pro8835Ser
XM_006715408.1:c.26491C>T (SYNE1)	XP_006715471.1:p.Pro8831Ser
XM_006715409.1:c.26482C>T (SYNE1)	XP_006715472.1:p.Pro8828Ser
XM_006715410.1:c.26461C>T (SYNE1)	XP_006715473.1:p.Pro8821Ser
XM_006715411.1:c.26452C>T (SYNE1)	XP_006715474.1:p.Pro8818Ser
XM_006715412.1:c.26446C>T (SYNE1)	XP_006715475.1:p.Pro8816Ser
XM_006715413.1:c.26434C>T (SYNE1)	XP_006715476.1:p.Pro8812Ser
XM_006715414.1:c.26431C>T (SYNE1)	XP_006715477.1:p.Pro8811Ser
XM_006715415.1:c.26392C>T (SYNE1)	XP_006715478.1:p.Pro8798Ser
XM_006715416.1:c.26377C>T (SYNE1)	XP_006715479.1:p.Pro8793Ser
XM_006715417.1:c.26362C>T (SYNE1)	XP_006715480.1:p.Pro8788Ser
XM_006715420.1:c.26350C>T (SYNE1)	XP_006715483.1:p.Pro8784Ser
XM_006715421.1:c.26347C>T (SYNE1)	XP_006715484.1:p.Pro8783Ser
XM_006715422.1:c.26344C>T (SYNE1)	XP_006715485.1:p.Pro8782Ser
XM_006715423.1:c.*167C>T (SYNE1)	XP_006715486.1:n.*167C>T
XM_006715424.1:c.*167C>T (SYNE1)	XP_006715487.1:n.*167C>T
XM_006715425.1:c.*167C>T (SYNE1)	XP_006715488.1:n.*167C>T
XM_011535641.1:c.26500C>T (SYNE1)	XP_011533943.1:p.Pro8834Ser
XM_011535642.1:c.26488C>T (SYNE1)	XP_011533944.1:p.Pro8830Ser
XM_011535643.1:c.26338C>T (SYNE1)	XP_011533945.1:p.Pro8780Ser
XM_011535644.1:c.24778C>T (SYNE1)	XP_011533946.1:p.Pro8260Ser
XM_011535645.1:c.24271C>T (SYNE1)	XP_011533947.1:p.Pro8091Ser
XM_011535647.1:c.19738C>T (SYNE1)	XP_011533949.1:p.Pro6580Ser
NM_001328100.1:c.851-2792G>A (ESR1)	NP_001315029.1:n.851-2792G>A
NM_001347701.1:c.*167C>T (SYNE1)	NP_001334630.1:n.*167C>T
NM_001347702.1:c.2890C>T (SYNE1)	NP_001334631.1:p.Pro964Ser
XM_006715408.2:c.26491C>T (SYNE1)	XP_006715471.1:p.Pro8831Ser
XM_006715410.2:c.26461C>T (SYNE1)	XP_006715473.1:p.Pro8821Ser
XM_006715412.2:c.26446C>T (SYNE1)	XP_006715475.1:p.Pro8816Ser
XM_006715413.2:c.26434C>T (SYNE1)	XP_006715476.1:p.Pro8812Ser
XM_006715415.2:c.26392C>T (SYNE1)	XP_006715478.1:p.Pro8798Ser
XM_006715416.2:c.26377C>T (SYNE1)	XP_006715479.1:p.Pro8793Ser
XM_006715417.2:c.26362C>T (SYNE1)	XP_006715480.1:p.Pro8788Ser
XM_006715420.2:c.26350C>T (SYNE1)	XP_006715483.1:p.Pro8784Ser
XM_006715421.2:c.26347C>T (SYNE1)	XP_006715484.1:p.Pro8783Ser
XM_006715423.2:c.*167C>T (SYNE1)	XP_006715486.1:n.*167C>T
XM_006715424.2:c.*167C>T (SYNE1)	XP_006715487.1:n.*167C>T
XM_006715425.2:c.*167C>T (SYNE1)	XP_006715488.1:n.*167C>T
XM_011535641.2:c.26500C>T (SYNE1)	XP_011533943.1:p.Pro8834Ser
XM_011535642.2:c.26488C>T (SYNE1)	XP_011533944.1:p.Pro8830Ser
XM_011535645.2:c.24271C>T (SYNE1)	XP_011533947.1:p.Pro8091Ser
XM_017010608.1:c.26503C>T (SYNE1)	XP_016866097.1:p.Pro8835Ser
XM_017010609.1:c.26503C>T (SYNE1)	XP_016866098.1:p.Pro8835Ser
XM_017010610.1:c.26482C>T (SYNE1)	XP_016866099.1:p.Pro8828Ser
XM_017010611.2:c.26476C>T (SYNE1)	XP_016866100.1:p.Pro8826Ser
XM_017010612.1:c.26425C>T (SYNE1)	XP_016866101.1:p.Pro8809Ser
XM_017010613.1:c.26389C>T (SYNE1)	XP_016866102.1:p.Pro8797Ser
XM_017010614.1:c.26347C>T (SYNE1)	XP_016866103.1:p.Pro8783Ser
XM_017010615.1:c.26236C>T (SYNE1)	XP_016866104.1:p.Pro8746Ser
XM_017010616.1:c.*167C>T (SYNE1)	XP_016866105.1:n.*167C>T
XM_017010617.1:c.*167C>T (SYNE1)	XP_016866106.1:n.*167C>T
XM_017010618.1:c.*167C>T (SYNE1)	XP_016866107.1:n.*167C>T
XM_017010619.1:c.24778C>T (SYNE1)	XP_016866108.1:p.Pro8260Ser
NM_182961.4:c.26356C>T (SYNE1) MANE Select	NP_892006.3:p.Pro8786Ser
NM_001328100.2:c.851-2792G>A (ESR1)	NP_001315029.1:n.851-2792G>A
NM_001347701.2:c.*167C>T (SYNE1)	NP_001334630.1:n.*167C>T
NM_001347702.2:c.2890C>T (SYNE1) MANE Plus Clinical	NP_001334631.1:p.Pro964Ser
NM_033071.5:c.26212C>T (SYNE1)	NP_149062.2:p.Pro8738Ser