Canonical Allele Identifier: CA355473574

Gene: SOX2 SOX2-OT

Linked Data

• ClinVar Variation Id: 1303152
• ClinVar RCV Id: RCV001756651
• dbSNP Id: rs2108522102
• MyVariant Identifiers: chr3:g.181430450A>G (hg19) ; chr3:g.181712662A>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000003.12:g.181712662A>G , CM000665.2:g.181712662A>G	GRCh38
NC_000003.11:g.181430450A>G , CM000665.1:g.181430450A>G	GRCh37
NC_000003.10:g.182913144A>G	NCBI36
NG_009080.1:g.5729A>G , LRG_719:g.5729A>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000325404.3:c.302A>G (SOX2) MANE Select	ENSP00000323588.1:p.His101Arg
ENST00000325404.2:c.302A>G (SOX2)	ENSP00000323588.1:p.His101Arg
NM_003106.3:c.302A>G (SOX2)	NP_003097.1:p.His101Arg
NR_004053.3:n.768-2523A>G (SOX2-OT)
NR_075089.1:n.767+12779A>G (SOX2-OT)
NR_075090.1:n.482-26907A>G (SOX2-OT)
NR_075091.1:n.783-2523A>G (SOX2-OT)
NR_075092.1:n.782+12779A>G (SOX2-OT)
NR_075093.1:n.473-26907A>G (SOX2-OT)
NM_003106.4:c.302A>G (SOX2) MANE Select	NP_003097.1:p.His101Arg