Canonical Allele Identifier: CA352174749

Gene: SCN11A

Linked Data

• MyVariant Identifiers: chr3:g.38936242A>T (hg19) ; chr3:g.38894751A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000003.12:g.38894751A>T , CM000665.2:g.38894751A>T	GRCh38
NC_000003.11:g.38936242A>T , CM000665.1:g.38936242A>T	GRCh37
NC_000003.10:g.38911246A>T	NCBI36
NG_033859.1:g.60811T>A
NG_033859.2:g.162236T>A

Transcript Alleles

HGVS	Amino-acid change
ENST00000302328.9:c.2617T>A MANE Select	ENSP00000307599.3:p.Cys873Ser
ENST00000668754.1:c.2617T>A	ENSP00000499569.1:p.Cys873Ser
ENST00000675223.1:c.2617T>A	ENSP00000502481.1:p.Cys873Ser
ENST00000675672.1:c.2617T>A	ENSP00000502446.1:p.Cys873Ser
ENST00000675892.1:c.2437T>A	ENSP00000502318.1:p.Cys813Ser
ENST00000676045.1:c.2661T>A	ENSP00000501685.1:n.2661T>A
ENST00000676176.1:c.2236T>A	ENSP00000501891.1:p.Cys746Ser
ENST00000302328.7:c.2617T>A	ENSP00000307599.3:p.Cys873Ser
ENST00000444237.2:c.2617T>A	ENSP00000408028.2:p.Cys873Ser
ENST00000456224.7:c.2617T>A	ENSP00000416757.3:p.Cys873Ser
NM_001287223.1:c.2617T>A	NP_001274152.1:p.Cys873Ser
NM_014139.2:c.2617T>A	NP_054858.2:p.Cys873Ser
XM_011533320.1:c.2617T>A	XP_011531622.1:p.Cys873Ser
XM_011533321.1:c.1954T>A	XP_011531623.1:p.Cys652Ser
XM_011533322.1:c.1165T>A	XP_011531624.1:p.Cys389Ser
NM_001349253.1:c.2617T>A	NP_001336182.1:p.Cys873Ser
XM_011533321.2:c.1954T>A	XP_011531623.1:p.Cys652Ser
XM_017005647.1:c.2992T>A	XP_016861136.1:p.Cys998Ser
XM_017005648.1:c.2419T>A	XP_016861137.1:p.Cys807Ser
XM_017005650.1:c.2617T>A	XP_016861139.1:p.Cys873Ser
XM_017005651.1:c.2344T>A	XP_016861140.1:p.Cys782Ser
XM_017005652.1:c.2617T>A	XP_016861141.1:p.Cys873Ser
XM_017005653.1:c.1021T>A	XP_016861142.1:p.Cys341Ser
NM_001349253.2:c.2617T>A MANE Select	NP_001336182.1:p.Cys873Ser
NM_014139.3:c.2617T>A	NP_054858.2:p.Cys873Ser