Canonical Allele Identifier: CA349077971

Gene: SCN9A SCN1A-AS1

Linked Data

• MyVariant Identifiers: chr2:g.167133761A>C (hg19) ; chr2:g.166277251A>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.166277251A>C , CM000664.2:g.166277251A>C	GRCh38
NC_000002.11:g.167133761A>C , CM000664.1:g.167133761A>C	GRCh37
NC_000002.10:g.166842007A>C	NCBI36
NG_012798.1:g.103737T>G , LRG_369:g.103737T>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000303354.11:c.2606T>G (SCN9A)	ENSP00000304748.7:p.Leu869Arg
ENST00000409435.6:c.2606T>G (SCN9A)	ENSP00000386330.2:p.Leu869Arg
ENST00000642356.2:c.2606T>G (SCN9A) MANE Select	ENSP00000495601.1:p.Leu869Arg
ENST00000644316.1:c.2573T>G (SCN9A)	ENSP00000493939.1:p.Leu858Arg
ENST00000645283.1:c.263T>G (SCN9A)	ENSP00000496086.1:p.Leu88Arg
ENST00000645907.1:c.2573T>G (SCN9A)	ENSP00000495983.1:p.Leu858Arg
ENST00000667201.2:c.1608T>G (SCN9A)
ENST00000303354.10:c.2606T>G (SCN9A)	ENSP00000304748.7:p.Leu869Arg
ENST00000409435.5:c.2606T>G (SCN9A)	ENSP00000386330.1:p.Leu869Arg
ENST00000409672.5:c.2573T>G (SCN9A)	ENSP00000386306.1:p.Leu858Arg
NM_002977.3:c.2573T>G , LRG_369t1:c.2573T>G (SCN9A)	NP_002968.1:p.Leu858Arg
NR_110260.1:n.1029+4A>C (SCN1A-AS1)
XM_005246757.1:c.2606T>G (SCN9A)	XP_005246814.1:p.Leu869Arg
XM_011511616.1:c.2606T>G (SCN9A)	XP_011509918.1:p.Leu869Arg
XM_011511617.1:c.2606T>G (SCN9A)	XP_011509919.1:p.Leu869Arg
XM_011511618.1:c.2573T>G (SCN9A)	XP_011509920.1:p.Leu858Arg
XM_011511619.1:c.2606T>G (SCN9A)	XP_011509921.1:p.Leu869Arg
NM_001365536.1:c.2606T>G (SCN9A) MANE Select	NP_001352465.1:p.Leu869Arg
XM_011511616.3:c.2606T>G (SCN9A)	XP_011509918.1:p.Leu869Arg
XM_011511617.2:c.2606T>G (SCN9A)	XP_011509919.1:p.Leu869Arg
XM_011511618.2:c.2573T>G (SCN9A)	XP_011509920.1:p.Leu858Arg
XM_011511619.2:c.2606T>G (SCN9A)	XP_011509921.1:p.Leu869Arg
XM_017004668.1:c.2219T>G (SCN9A)	XP_016860157.1:p.Leu740Arg
XM_017004669.1:c.1862T>G (SCN9A)	XP_016860158.1:p.Leu621Arg
XR_001738886.1:n.2920T>G (SCN9A)