Canonical Allele Identifier: CA349077792

Gene: SCN9A SCN1A-AS1

Linked Data

• MyVariant Identifiers: chr2:g.167133678A>C (hg19) ; chr2:g.166277168A>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.166277168A>C , CM000664.2:g.166277168A>C	GRCh38
NC_000002.11:g.167133678A>C , CM000664.1:g.167133678A>C	GRCh37
NC_000002.10:g.166841924A>C	NCBI36
NG_012798.1:g.103820T>G , LRG_369:g.103820T>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000303354.11:c.2689T>G (SCN9A)	ENSP00000304748.7:p.Cys897Gly
ENST00000409435.6:c.2689T>G (SCN9A)	ENSP00000386330.2:p.Cys897Gly
ENST00000642356.2:c.2689T>G (SCN9A) MANE Select	ENSP00000495601.1:p.Cys897Gly
ENST00000644316.1:c.2656T>G (SCN9A)	ENSP00000493939.1:p.Cys886Gly
ENST00000645283.1:c.346T>G (SCN9A)	ENSP00000496086.1:p.Cys116Gly
ENST00000645907.1:c.2656T>G (SCN9A)	ENSP00000495983.1:p.Cys886Gly
ENST00000667201.2:c.1691T>G (SCN9A)
ENST00000303354.10:c.2689T>G (SCN9A)	ENSP00000304748.7:p.Cys897Gly
ENST00000409435.5:c.2689T>G (SCN9A)	ENSP00000386330.1:p.Cys897Gly
ENST00000409672.5:c.2656T>G (SCN9A)	ENSP00000386306.1:p.Cys886Gly
NM_002977.3:c.2656T>G , LRG_369t1:c.2656T>G (SCN9A)	NP_002968.1:p.Cys886Gly
NR_110260.1:n.950A>C (SCN1A-AS1)
XM_005246757.1:c.2689T>G (SCN9A)	XP_005246814.1:p.Cys897Gly
XM_011511616.1:c.2689T>G (SCN9A)	XP_011509918.1:p.Cys897Gly
XM_011511617.1:c.2689T>G (SCN9A)	XP_011509919.1:p.Cys897Gly
XM_011511618.1:c.2656T>G (SCN9A)	XP_011509920.1:p.Cys886Gly
XM_011511619.1:c.2689T>G (SCN9A)	XP_011509921.1:p.Cys897Gly
NM_001365536.1:c.2689T>G (SCN9A) MANE Select	NP_001352465.1:p.Cys897Gly
XM_011511616.3:c.2689T>G (SCN9A)	XP_011509918.1:p.Cys897Gly
XM_011511617.2:c.2689T>G (SCN9A)	XP_011509919.1:p.Cys897Gly
XM_011511618.2:c.2656T>G (SCN9A)	XP_011509920.1:p.Cys886Gly
XM_011511619.2:c.2689T>G (SCN9A)	XP_011509921.1:p.Cys897Gly
XM_017004668.1:c.2302T>G (SCN9A)	XP_016860157.1:p.Cys768Gly
XM_017004669.1:c.1945T>G (SCN9A)	XP_016860158.1:p.Cys649Gly
XR_001738886.1:n.3003T>G (SCN9A)