Canonical Allele Identifier: CA349019516

Gene: SCN2A

Linked Data

• COSMIC: COSM4086219 ; COSM4086220
• MyVariant Identifiers: chr2:g.166210751A>C (hg19) ; chr2:g.165354241A>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.165354241A>C , CM000664.2:g.165354241A>C	GRCh38
NC_000002.11:g.166210751A>C , CM000664.1:g.166210751A>C	GRCh37
NC_000002.10:g.165918997A>C	NCBI36
NG_008143.1:g.119840A>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000631182.3:c.2969A>C MANE Plus Clinical	ENSP00000486885.1:p.Asn990Thr
ENST00000375437.7:c.2969A>C MANE Select	ENSP00000364586.2:p.Asn990Thr
ENST00000636071.2:c.2969A>C	ENSP00000490107.1:p.Asn990Thr
ENST00000636135.1:c.*1288A>C	ENSP00000489821.1:n.*1288A>C
ENST00000636384.2:c.*956A>C	ENSP00000490765.1:n.*956A>C
ENST00000636662.2:c.*3492A>C	ENSP00000489873.1:n.*3492A>C
ENST00000636769.1:c.*911A>C	ENSP00000490800.1:n.*911A>C
ENST00000636985.2:c.2573A>C	ENSP00000490849.1:p.Asn858Thr
ENST00000637266.2:c.2969A>C	ENSP00000490866.1:p.Asn990Thr
ENST00000673831.1:c.715A>C	ENSP00000501305.1:n.715A>C
ENST00000673883.1:c.534A>C	ENSP00000501309.1:n.534A>C
ENST00000674133.1:c.820A>C
ENST00000283256.10:c.2969A>C	ENSP00000283256.6:p.Asn990Thr
ENST00000375427.4:c.2969A>C	ENSP00000364576.2:p.Asn990Thr
ENST00000375437.6:c.2969A>C	ENSP00000364586.2:p.Asn990Thr
ENST00000480032.4:n.3112A>C
ENST00000631182.2:c.2969A>C	ENSP00000486885.1:p.Asn990Thr
NM_001040142.1:c.2969A>C	NP_001035232.1:p.Asn990Thr
NM_001040143.1:c.2969A>C	NP_001035233.1:p.Asn990Thr
NM_021007.2:c.2969A>C	NP_066287.2:p.Asn990Thr
XM_005246750.2:c.2969A>C	XP_005246807.1:p.Asn990Thr
XM_005246753.2:c.2969A>C	XP_005246810.1:p.Asn990Thr
XM_005246754.3:c.2939A>C	XP_005246811.1:p.Asn980Thr
XM_005246755.3:c.2216A>C	XP_005246812.1:p.Asn739Thr
XM_011511608.1:c.2969A>C	XP_011509910.1:p.Asn990Thr
XM_011511609.1:c.2969A>C	XP_011509911.1:p.Asn990Thr
XM_005246753.3:c.2969A>C	XP_005246810.1:p.Asn990Thr
XM_017004656.1:c.2969A>C	XP_016860145.1:p.Asn990Thr
XM_017004657.1:c.2969A>C	XP_016860146.1:p.Asn990Thr
XM_017004658.1:c.2216A>C	XP_016860147.1:p.Asn739Thr
XM_017004659.1:c.767A>C	XP_016860148.1:p.Asn256Thr
XM_024453037.1:c.2216A>C	XP_024308805.1:p.Asn739Thr
NM_001040142.2:c.2969A>C MANE Select	NP_001035232.1:p.Asn990Thr
NM_001040143.2:c.2969A>C	NP_001035233.1:p.Asn990Thr
NM_001371246.1:c.2969A>C MANE Plus Clinical	NP_001358175.1:p.Asn990Thr
NM_001371247.1:c.2969A>C	NP_001358176.1:p.Asn990Thr
NM_021007.3:c.2969A>C	NP_066287.2:p.Asn990Thr