Canonical Allele Identifier: CA346761488

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 525677
• ClinVar RCV Id: RCV000629856
• dbSNP Id: rs1553333634
• MyVariant Identifiers: chr2:g.48033723G>C (hg19) ; chr2:g.47806584G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47806584G>C , CM000664.2:g.47806584G>C	GRCh38
NC_000002.11:g.48033723G>C , CM000664.1:g.48033723G>C	GRCh37
NC_000002.10:g.47887227G>C	NCBI36
NG_007111.1:g.28438G>C , LRG_219:g.28438G>C
NG_008397.1:g.104092C>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.3637G>C (MSH6)	ENSP00000406248.2:p.Val1213Leu
ENST00000420813.6:c.3637G>C (MSH6)	ENSP00000390382.2:p.Val1213Leu
ENST00000455383.6:c.3637G>C (MSH6)	ENSP00000397484.2:p.Val1213Leu
ENST00000700004.2:c.3550G>C (MSH6)	ENSP00000514752.2:p.Val1184Leu
ENST00000699999.1:n.4608G>C (MSH6)
ENST00000700000.1:c.2368G>C (MSH6)	ENSP00000514749.1:p.Val790Leu
ENST00000700002.1:c.3940G>C (MSH6)	ENSP00000514750.1:p.Val1314Leu
ENST00000700003.1:c.1389G>C (MSH6)	ENSP00000514751.1:n.1389G>C
ENST00000700004.1:c.2707G>C (MSH6)	ENSP00000514752.1:p.Val903Leu
ENST00000700005.1:n.2785G>C (MSH6)
ENST00000700006.1:n.5092G>C (MSH6)
ENST00000700007.1:n.2529G>C (MSH6)
ENST00000700008.1:n.2196G>C (MSH6)
ENST00000700009.1:n.2598G>C (MSH6)
ENST00000700010.1:n.1343G>C (MSH6)
ENST00000700011.1:n.3228G>C (MSH6)
ENST00000682451.1:n.4164C>G (FBXO11)
ENST00000684712.1:n.4426C>G (FBXO11)
ENST00000234420.11:c.3934G>C (MSH6) MANE Select	ENSP00000234420.5:p.Val1312Leu
ENST00000540021.6:c.3544G>C (MSH6)	ENSP00000446475.1:p.Val1182Leu
ENST00000652107.1:c.3637G>C (MSH6)	ENSP00000498629.1:p.Val1213Leu
ENST00000673637.1:c.3637G>C (MSH6)	ENSP00000501310.1:p.Val1213Leu
ENST00000234420.9:c.3934G>C (MSH6)	ENSP00000234420.4:p.Val1312Leu
ENST00000405808.5:c.169+1611C>G (FBXO11)	ENSP00000385127.1:n.169+1611C>G
ENST00000434234.5:c.*124+1410C>G (FBXO11)	ENSP00000402692.1:n.*124+1410C>G
ENST00000445503.5:c.*3281G>C (MSH6)	ENSP00000405294.1:n.*3281G>C
ENST00000538136.1:c.3028G>C (MSH6)	ENSP00000438580.1:p.Val1010Leu
ENST00000540021.5:c.3544G>C (MSH6)	ENSP00000446475.1:p.Val1182Leu
ENST00000614496.4:c.3028G>C (MSH6)	ENSP00000477844.1:p.Val1010Leu
ENST00000622629.4:c.835G>C (MSH6)	ENSP00000482078.1:p.Val279Leu
NM_000179.2:c.3934G>C , LRG_219t1:c.3934G>C (MSH6)	NP_000170.1:p.Val1312Leu
NM_001281492.1:c.3544G>C (MSH6)	NP_001268421.1:p.Val1182Leu
NM_001281493.1:c.3028G>C (MSH6)	NP_001268422.1:p.Val1010Leu
NM_001281494.1:c.3028G>C (MSH6)	NP_001268423.1:p.Val1010Leu
XM_005264271.1:c.3637G>C (MSH6)	XP_005264328.1:p.Val1213Leu
XM_011532798.1:c.3751G>C (MSH6)	XP_011531100.1:p.Val1251Leu
XM_011532799.1:c.3637G>C (MSH6)	XP_011531101.1:p.Val1213Leu
XM_011532800.1:c.3637G>C (MSH6)	XP_011531102.1:p.Val1213Leu
XM_024452819.1:c.4027G>C (MSH6)	XP_024308587.1:p.Val1343Leu
XM_024452820.1:c.3844G>C (MSH6)	XP_024308588.1:p.Val1282Leu
XM_024452821.1:c.3730G>C (MSH6)	XP_024308589.1:p.Val1244Leu
XM_024452822.1:c.3121G>C (MSH6)	XP_024308590.1:p.Val1041Leu
NM_000179.3:c.3934G>C (MSH6) MANE Select	NP_000170.1:p.Val1312Leu
NM_001281492.2:c.3544G>C (MSH6)	NP_001268421.1:p.Val1182Leu
NM_001281493.2:c.3028G>C (MSH6)	NP_001268422.1:p.Val1010Leu
NM_001281494.2:c.3028G>C (MSH6)	NP_001268423.1:p.Val1010Leu