Canonical Allele Identifier: CA346750745

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 485871
• ClinVar RCV Id: RCV000564526 ; RCV001070185
• dbSNP Id: rs1553413412
• COSMIC: COSM331329
• MyVariant Identifiers: chr2:g.48027163C>T (hg19) ; chr2:g.47800024C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47800024C>T , CM000664.2:g.47800024C>T	GRCh38
NC_000002.11:g.48027163C>T , CM000664.1:g.48027163C>T	GRCh37
NC_000002.10:g.47880667C>T	NCBI36
NG_007111.1:g.21878C>T , LRG_219:g.21878C>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.1744C>T (MSH6)	ENSP00000406248.2:p.Leu582Phe
ENST00000420813.6:c.1744C>T (MSH6)	ENSP00000390382.2:p.Leu582Phe
ENST00000455383.6:c.1744C>T (MSH6)	ENSP00000397484.2:p.Leu582Phe
ENST00000700004.2:c.2041C>T (MSH6)	ENSP00000514752.2:p.Leu681Phe
ENST00000699999.1:n.2125C>T (MSH6)
ENST00000700000.1:c.1606+435C>T (MSH6)	ENSP00000514749.1:n.1606+435C>T
ENST00000700002.1:c.2047C>T (MSH6)	ENSP00000514750.1:p.Leu683Phe
ENST00000700003.1:c.628-3396C>T (MSH6)	ENSP00000514751.1:n.628-3396C>T
ENST00000700004.1:c.1198C>T (MSH6)	ENSP00000514752.1:p.Leu400Phe
ENST00000234420.11:c.2041C>T (MSH6) MANE Select	ENSP00000234420.5:p.Leu681Phe
ENST00000540021.6:c.1651C>T (MSH6)	ENSP00000446475.1:p.Leu551Phe
ENST00000652107.1:c.1744C>T (MSH6)	ENSP00000498629.1:p.Leu582Phe
ENST00000673637.1:c.1744C>T (MSH6)	ENSP00000501310.1:p.Leu582Phe
ENST00000234420.9:c.2041C>T (MSH6)	ENSP00000234420.4:p.Leu681Phe
ENST00000405808.5:c.169+8171G>A (FBXO11)	ENSP00000385127.1:n.169+8171G>A
ENST00000434234.5:c.*124+7970G>A (FBXO11)	ENSP00000402692.1:n.*124+7970G>A
ENST00000445503.5:c.*1388C>T (MSH6)	ENSP00000405294.1:n.*1388C>T
ENST00000538136.1:c.1135C>T (MSH6)	ENSP00000438580.1:p.Leu379Phe
ENST00000540021.5:c.1651C>T (MSH6)	ENSP00000446475.1:p.Leu551Phe
ENST00000614496.4:c.1135C>T (MSH6)	ENSP00000477844.1:p.Leu379Phe
ENST00000616033.4:c.2038C>T (MSH6)	ENSP00000480261.1:p.Leu680Phe
ENST00000622629.4:c.-1056C>T (MSH6)	ENSP00000482078.1:n.-1056C>T
NM_000179.2:c.2041C>T , LRG_219t1:c.2041C>T (MSH6)	NP_000170.1:p.Leu681Phe
NM_001281492.1:c.1651C>T (MSH6)	NP_001268421.1:p.Leu551Phe
NM_001281493.1:c.1135C>T (MSH6)	NP_001268422.1:p.Leu379Phe
NM_001281494.1:c.1135C>T (MSH6)	NP_001268423.1:p.Leu379Phe
XM_005264271.1:c.1744C>T (MSH6)	XP_005264328.1:p.Leu582Phe
XM_011532798.1:c.1858C>T (MSH6)	XP_011531100.1:p.Leu620Phe
XM_011532799.1:c.1744C>T (MSH6)	XP_011531101.1:p.Leu582Phe
XM_011532800.1:c.1744C>T (MSH6)	XP_011531102.1:p.Leu582Phe
XM_024452819.1:c.2041C>T (MSH6)	XP_024308587.1:p.Leu681Phe
XM_024452820.1:c.1858C>T (MSH6)	XP_024308588.1:p.Leu620Phe
XM_024452821.1:c.1744C>T (MSH6)	XP_024308589.1:p.Leu582Phe
XM_024452822.1:c.1135C>T (MSH6)	XP_024308590.1:p.Leu379Phe
NM_000179.3:c.2041C>T (MSH6) MANE Select	NP_000170.1:p.Leu681Phe
NM_001281492.2:c.1651C>T (MSH6)	NP_001268421.1:p.Leu551Phe
NM_001281493.2:c.1135C>T (MSH6)	NP_001268422.1:p.Leu379Phe
NM_001281494.2:c.1135C>T (MSH6)	NP_001268423.1:p.Leu379Phe