Canonical Allele Identifier: CA346750678

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 1784363
• ClinVar RCV Id: RCV002417300 ; RCV003464541
• dbSNP Id: rs63749857
• gnomAD v3: 2-47799991-G-T
• gnomAD v4: 2-47799991-G-T
• MyVariant Identifiers: chr2:g.48027130G>T (hg19) ; chr2:g.47799991G>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47799991G>T , CM000664.2:g.47799991G>T	GRCh38
NC_000002.11:g.48027130G>T , CM000664.1:g.48027130G>T	GRCh37
NC_000002.10:g.47880634G>T	NCBI36
NG_007111.1:g.21845G>T , LRG_219:g.21845G>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.1711G>T (MSH6)	ENSP00000406248.2:p.Gly571Trp
ENST00000420813.6:c.1711G>T (MSH6)	ENSP00000390382.2:p.Gly571Trp
ENST00000455383.6:c.1711G>T (MSH6)	ENSP00000397484.2:p.Gly571Trp
ENST00000700004.2:c.2008G>T (MSH6)	ENSP00000514752.2:p.Gly670Trp
ENST00000699999.1:n.2092G>T (MSH6)
ENST00000700000.1:c.1606+402G>T (MSH6)	ENSP00000514749.1:n.1606+402G>T
ENST00000700002.1:c.2014G>T (MSH6)	ENSP00000514750.1:p.Gly672Trp
ENST00000700003.1:c.628-3429G>T (MSH6)	ENSP00000514751.1:n.628-3429G>T
ENST00000700004.1:c.1165G>T (MSH6)	ENSP00000514752.1:p.Gly389Trp
ENST00000234420.11:c.2008G>T (MSH6) MANE Select	ENSP00000234420.5:p.Gly670Trp
ENST00000540021.6:c.1618G>T (MSH6)	ENSP00000446475.1:p.Gly540Trp
ENST00000652107.1:c.1711G>T (MSH6)	ENSP00000498629.1:p.Gly571Trp
ENST00000673637.1:c.1711G>T (MSH6)	ENSP00000501310.1:p.Gly571Trp
ENST00000234420.9:c.2008G>T (MSH6)	ENSP00000234420.4:p.Gly670Trp
ENST00000405808.5:c.169+8204C>A (FBXO11)	ENSP00000385127.1:n.169+8204C>A
ENST00000434234.5:c.*124+8003C>A (FBXO11)	ENSP00000402692.1:n.*124+8003C>A
ENST00000445503.5:c.*1355G>T (MSH6)	ENSP00000405294.1:n.*1355G>T
ENST00000538136.1:c.1102G>T (MSH6)	ENSP00000438580.1:p.Gly368Trp
ENST00000540021.5:c.1618G>T (MSH6)	ENSP00000446475.1:p.Gly540Trp
ENST00000614496.4:c.1102G>T (MSH6)	ENSP00000477844.1:p.Gly368Trp
ENST00000616033.4:c.2005G>T (MSH6)	ENSP00000480261.1:p.Gly669Trp
ENST00000622629.4:c.-1089G>T (MSH6)	ENSP00000482078.1:n.-1089G>T
NM_000179.2:c.2008G>T , LRG_219t1:c.2008G>T (MSH6)	NP_000170.1:p.Gly670Trp
NM_001281492.1:c.1618G>T (MSH6)	NP_001268421.1:p.Gly540Trp
NM_001281493.1:c.1102G>T (MSH6)	NP_001268422.1:p.Gly368Trp
NM_001281494.1:c.1102G>T (MSH6)	NP_001268423.1:p.Gly368Trp
XM_005264271.1:c.1711G>T (MSH6)	XP_005264328.1:p.Gly571Trp
XM_011532798.1:c.1825G>T (MSH6)	XP_011531100.1:p.Gly609Trp
XM_011532799.1:c.1711G>T (MSH6)	XP_011531101.1:p.Gly571Trp
XM_011532800.1:c.1711G>T (MSH6)	XP_011531102.1:p.Gly571Trp
XM_024452819.1:c.2008G>T (MSH6)	XP_024308587.1:p.Gly670Trp
XM_024452820.1:c.1825G>T (MSH6)	XP_024308588.1:p.Gly609Trp
XM_024452821.1:c.1711G>T (MSH6)	XP_024308589.1:p.Gly571Trp
XM_024452822.1:c.1102G>T (MSH6)	XP_024308590.1:p.Gly368Trp
NM_000179.3:c.2008G>T (MSH6) MANE Select	NP_000170.1:p.Gly670Trp
NM_001281492.2:c.1618G>T (MSH6)	NP_001268421.1:p.Gly540Trp
NM_001281493.2:c.1102G>T (MSH6)	NP_001268422.1:p.Gly368Trp
NM_001281494.2:c.1102G>T (MSH6)	NP_001268423.1:p.Gly368Trp