Canonical Allele Identifier: CA346750539

Gene: LHCGR STON1-GTF2A1L GTF2A1L

Linked Data

• MyVariant Identifiers: chr2:g.48915986T>A (hg19) ; chr2:g.48688847T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.48688847T>A , CM000664.2:g.48688847T>A	GRCh38
NC_000002.11:g.48915986T>A , CM000664.1:g.48915986T>A	GRCh37
NC_000002.10:g.48769490T>A	NCBI36
NG_008193.1:g.71895A>T
NG_033050.1:g.163923T>A
NG_008193.2:g.71895A>T
NG_033050.2:g.163923T>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000294954.12:c.950A>T (LHCGR) MANE Select	ENSP00000294954.6:p.Tyr317Phe
ENST00000294954.11:c.950A>T (LHCGR)	ENSP00000294954.6:p.Tyr317Phe
ENST00000401907.5:c.948-708A>T (LHCGR)	ENSP00000385406.1:n.948-708A>T
ENST00000402114.6:c.3441+17167T>A (STON1-GTF2A1L)	ENSP00000385701.1:n.3441+17167T>A
ENST00000403273.5:c.948-264A>T (LHCGR)	ENSP00000385847.1:n.948-264A>T
ENST00000405626.5:c.869A>T (LHCGR)	ENSP00000386033.1:p.Tyr290Phe
ENST00000508440.1:c.276+17167T>A (GTF2A1L)	ENSP00000421474.1:n.276+17167T>A
ENST00000602369.3:c.*220+5377A>T	ENSP00000473498.1:n.*220+5377A>T
NM_000233.3:c.950A>T (LHCGR)	NP_000224.2:p.Tyr317Phe
NM_001198593.1:c.3441+17167T>A (STON1-GTF2A1L)	NP_001185522.1:n.3441+17167T>A
XM_005264309.2:c.-8A>T (LHCGR)	XP_005264366.1:n.-8A>T
XM_006712015.2:c.20A>T (LHCGR)	XP_006712078.1:p.Tyr7Phe
XM_011532828.1:c.875A>T (LHCGR)	XP_011531130.1:p.Tyr292Phe
XM_011532829.1:c.689A>T (LHCGR)	XP_011531131.1:p.Tyr230Phe
XM_011532830.1:c.608A>T (LHCGR)	XP_011531132.1:p.Tyr203Phe
XM_011532831.1:c.314A>T (LHCGR)	XP_011531133.1:p.Tyr105Phe
XM_011532832.1:c.20A>T (LHCGR)	XP_011531134.1:p.Tyr7Phe
XM_011532833.1:c.20A>T (LHCGR)	XP_011531135.1:p.Tyr7Phe
XM_011532834.1:c.-8A>T (LHCGR)	XP_011531136.1:n.-8A>T
XM_005264309.3:c.-8A>T (LHCGR)	XP_005264366.1:n.-8A>T
XM_006712015.3:c.20A>T (LHCGR)	XP_006712078.1:p.Tyr7Phe
XM_011532834.2:c.-8A>T (LHCGR)	XP_011531136.1:n.-8A>T
XM_017004089.1:c.695A>T (LHCGR)	XP_016859578.1:p.Tyr232Phe
XM_017004090.1:c.314A>T (LHCGR)	XP_016859579.1:p.Tyr105Phe
NM_000233.4:c.950A>T (LHCGR) MANE Select	NP_000224.2:p.Tyr317Phe
NM_001198593.2:c.3441+17167T>A (STON1-GTF2A1L)	NP_001185522.1:n.3441+17167T>A