Canonical Allele Identifier: CA346749090

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 1722242
• ClinVar RCV Id: RCV002302386
• dbSNP Id: rs2104366234
• MyVariant Identifiers: chr2:g.48026887T>A (hg19) ; chr2:g.47799748T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47799748T>A , CM000664.2:g.47799748T>A	GRCh38
NC_000002.11:g.48026887T>A , CM000664.1:g.48026887T>A	GRCh37
NC_000002.10:g.47880391T>A	NCBI36
NG_007111.1:g.21602T>A , LRG_219:g.21602T>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.1468T>A (MSH6)	ENSP00000406248.2:p.Tyr490Asn
ENST00000420813.6:c.1468T>A (MSH6)	ENSP00000390382.2:p.Tyr490Asn
ENST00000455383.6:c.1468T>A (MSH6)	ENSP00000397484.2:p.Tyr490Asn
ENST00000700004.2:c.1765T>A (MSH6)	ENSP00000514752.2:p.Tyr589Asn
ENST00000699999.1:n.1849T>A (MSH6)
ENST00000700000.1:c.1606+159T>A (MSH6)	ENSP00000514749.1:n.1606+159T>A
ENST00000700002.1:c.1771T>A (MSH6)	ENSP00000514750.1:p.Tyr591Asn
ENST00000700003.1:c.628-3672T>A (MSH6)	ENSP00000514751.1:n.628-3672T>A
ENST00000700004.1:c.922T>A (MSH6)	ENSP00000514752.1:p.Tyr308Asn
ENST00000234420.11:c.1765T>A (MSH6) MANE Select	ENSP00000234420.5:p.Tyr589Asn
ENST00000540021.6:c.1375T>A (MSH6)	ENSP00000446475.1:p.Tyr459Asn
ENST00000652107.1:c.1468T>A (MSH6)	ENSP00000498629.1:p.Tyr490Asn
ENST00000673637.1:c.1468T>A (MSH6)	ENSP00000501310.1:p.Tyr490Asn
ENST00000234420.9:c.1765T>A (MSH6)	ENSP00000234420.4:p.Tyr589Asn
ENST00000405808.5:c.169+8447A>T (FBXO11)	ENSP00000385127.1:n.169+8447A>T
ENST00000434234.5:c.*124+8246A>T (FBXO11)	ENSP00000402692.1:n.*124+8246A>T
ENST00000445503.5:c.*1112T>A (MSH6)	ENSP00000405294.1:n.*1112T>A
ENST00000538136.1:c.859T>A (MSH6)	ENSP00000438580.1:p.Tyr287Asn
ENST00000540021.5:c.1375T>A (MSH6)	ENSP00000446475.1:p.Tyr459Asn
ENST00000614496.4:c.859T>A (MSH6)	ENSP00000477844.1:p.Tyr287Asn
ENST00000616033.4:c.1762T>A (MSH6)	ENSP00000480261.1:p.Tyr588Asn
ENST00000622629.4:c.-1332T>A (MSH6)	ENSP00000482078.1:n.-1332T>A
NM_000179.2:c.1765T>A , LRG_219t1:c.1765T>A (MSH6)	NP_000170.1:p.Tyr589Asn
NM_001281492.1:c.1375T>A (MSH6)	NP_001268421.1:p.Tyr459Asn
NM_001281493.1:c.859T>A (MSH6)	NP_001268422.1:p.Tyr287Asn
NM_001281494.1:c.859T>A (MSH6)	NP_001268423.1:p.Tyr287Asn
XM_005264271.1:c.1468T>A (MSH6)	XP_005264328.1:p.Tyr490Asn
XM_011532798.1:c.1582T>A (MSH6)	XP_011531100.1:p.Tyr528Asn
XM_011532799.1:c.1468T>A (MSH6)	XP_011531101.1:p.Tyr490Asn
XM_011532800.1:c.1468T>A (MSH6)	XP_011531102.1:p.Tyr490Asn
XM_024452819.1:c.1765T>A (MSH6)	XP_024308587.1:p.Tyr589Asn
XM_024452820.1:c.1582T>A (MSH6)	XP_024308588.1:p.Tyr528Asn
XM_024452821.1:c.1468T>A (MSH6)	XP_024308589.1:p.Tyr490Asn
XM_024452822.1:c.859T>A (MSH6)	XP_024308590.1:p.Tyr287Asn
NM_000179.3:c.1765T>A (MSH6) MANE Select	NP_000170.1:p.Tyr589Asn
NM_001281492.2:c.1375T>A (MSH6)	NP_001268421.1:p.Tyr459Asn
NM_001281493.2:c.859T>A (MSH6)	NP_001268422.1:p.Tyr287Asn
NM_001281494.2:c.859T>A (MSH6)	NP_001268423.1:p.Tyr287Asn