Canonical Allele Identifier: CA346746404

Gene: LHCGR STON1-GTF2A1L GTF2A1L

Linked Data

• MyVariant Identifiers: chr2:g.48915395C>T (hg19) ; chr2:g.48688256C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.48688256C>T , CM000664.2:g.48688256C>T	GRCh38
NC_000002.11:g.48915395C>T , CM000664.1:g.48915395C>T	GRCh37
NC_000002.10:g.48768899C>T	NCBI36
NG_008193.1:g.72486G>A
NG_033050.1:g.163332C>T
NG_008193.2:g.72486G>A
NG_033050.2:g.163332C>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000294954.12:c.1541G>A (LHCGR) MANE Select	ENSP00000294954.6:p.Cys514Tyr
ENST00000294954.11:c.1541G>A (LHCGR)	ENSP00000294954.6:p.Cys514Tyr
ENST00000401907.5:c.948-117G>A (LHCGR)	ENSP00000385406.1:n.948-117G>A
ENST00000402114.6:c.3441+16576C>T (STON1-GTF2A1L)	ENSP00000385701.1:n.3441+16576C>T
ENST00000403273.5:c.*285G>A (LHCGR)	ENSP00000385847.1:n.*285G>A
ENST00000405626.5:c.1460G>A (LHCGR)	ENSP00000386033.1:p.Cys487Tyr
ENST00000508440.1:c.276+16576C>T (GTF2A1L)	ENSP00000421474.1:n.276+16576C>T
ENST00000602369.3:c.*220+5968G>A	ENSP00000473498.1:n.*220+5968G>A
NM_000233.3:c.1541G>A (LHCGR)	NP_000224.2:p.Cys514Tyr
NM_001198593.1:c.3441+16576C>T (STON1-GTF2A1L)	NP_001185522.1:n.3441+16576C>T
XM_005264309.2:c.584G>A (LHCGR)	XP_005264366.1:p.Cys195Tyr
XM_006712015.2:c.611G>A (LHCGR)	XP_006712078.1:p.Cys204Tyr
XM_011532828.1:c.1466G>A (LHCGR)	XP_011531130.1:p.Cys489Tyr
XM_011532829.1:c.1280G>A (LHCGR)	XP_011531131.1:p.Cys427Tyr
XM_011532830.1:c.1199G>A (LHCGR)	XP_011531132.1:p.Cys400Tyr
XM_011532831.1:c.905G>A (LHCGR)	XP_011531133.1:p.Cys302Tyr
XM_011532832.1:c.611G>A (LHCGR)	XP_011531134.1:p.Cys204Tyr
XM_011532833.1:c.611G>A (LHCGR)	XP_011531135.1:p.Cys204Tyr
XM_011532834.1:c.584G>A (LHCGR)	XP_011531136.1:p.Cys195Tyr
XM_005264309.3:c.584G>A (LHCGR)	XP_005264366.1:p.Cys195Tyr
XM_006712015.3:c.611G>A (LHCGR)	XP_006712078.1:p.Cys204Tyr
XM_011532834.2:c.584G>A (LHCGR)	XP_011531136.1:p.Cys195Tyr
XM_017004089.1:c.1286G>A (LHCGR)	XP_016859578.1:p.Cys429Tyr
XM_017004090.1:c.905G>A (LHCGR)	XP_016859579.1:p.Cys302Tyr
NM_000233.4:c.1541G>A (LHCGR) MANE Select	NP_000224.2:p.Cys514Tyr
NM_001198593.2:c.3441+16576C>T (STON1-GTF2A1L)	NP_001185522.1:n.3441+16576C>T